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Name : Patl_3251 (Patl_3251) Accession : YP_662811.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 3900253 - 3902286 bp Length : 2034 bp Strand : - Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: ilo:IL1101 cytochrome c biogenesis factor DNA sequence : ATGGTGGCTGAATTAGGTAATATTTCACTGGTCTTAGCGTTACTCATGGCTATATCACTCGCTATTTATCCTTTGTGGGG CGCACAAAAAGACCACTTAAAACTGATGCAAATGGCCAAACCGCTGGCCATCGGTATGTTTGCGTTTACCCTAGTTGCGT ATATTTGTTTAACGTGGGCATTTGTACACGACGATTTCAGCTTGGCGTACGTGGCGAGCACCTCTAACAGTACCTTGCCG CTTGTGTATAAATACACTGCCGTATGGGGCGGGCATGAAGGCTCATTCTTGCTGTGGGTAATGATCTTTTCGATTTGGAC CGTCGCTGTCGCGTTGTTTAGTAAAGCGATAGAGCTGAAAATGGTGGCTCGCGTTTTGTCTATTCTTGGCATGGTAGCGA TTGGTTTCTACTTGTTTATGTTGCTTACATCGAATCCATTTGATGTATTACTCCCGTTTTATCCTGTTGATGGGCGTGAT CTAAACCCGCTTCTTCAAGACTTCGGCATGATAATTCATCCGCCTATGCTGTACATGGGGTATGTTGGGTTTTCTGTGGC TTTCGCTTTCGCCTTAGCCGCATTGATTTCTGGTCAGTTAGATTCAACGTGGGCCCGTTGGTCTCGCCCTTGGACTATTG CTGCATGGTCATTTCTCACCGTAGGGATCGCCCTAGGTAGTTGGTGGGCTTATTATGAACTTGGCTGGGGCGGTTGGTGG TTTTGGGATCCTGTTGAAAACGCCTCATTTATGCCGTGGCTCGTAGGTACCGCGTTAATGCACAGCTTAGCGGTAACCGA GAAGCGCAAAGTGTTTAAATCATGGACTGTTTTACTGGCTATTGCTGCGTTCTCGTTAAGCCTACTTGGTACATTTTTAG TGCGCTCGGGTATTTTGGTGTCTGTGCACTCTTTTGCCAGTGACCCAAGTCGAGGTCTCTTTATTTTAGGTTTACTTGTT GTGGTGATTGGCGGATCTCTTTTACTGTTCGCAATCCGTGCACCACAACTTAAAGGCGCAGGACGTTACAAATTATTCTC CCGTGAGGTGATGCTCGCTGGAAACAACGTCTTTCTGACCGCGGCCTGCTTGGTGGTGTTATTAGGAACACTTTTACCAT TAGTGCACAAAGAGTTAGGTCTGGGGTCTATTTCTATTGGCGCGCCTTTCTTTAACCAAATGTTTAGCTATTTGATTGTG CCCTTTGTATTACTGATGGGCATCGGGCCATTGTCACGCTGGAAGAATCAGGCTCCCTCGGCGCTGTATAAACAGTTATT GCTCGCGTTTGGACTGAGCTTGTCCGCTGCTATCTTGGTGACTGCGAATTTTGAGCAGACATCCTATATGGCGGCGTTAG GCATGGTTATGGGATTCTGGATCGTGGTCACTACGATCATGGAAATACACCAGCGAATTAATGCTGATAAAAAACTGTCA CAACAACCGATTTTCTCGGCCTTGGCTAAACTGACGCCTAGCCATTGGGGCATGGTGGTCGGCCACTTGGGCTTCGCTGT CAGTATTATTGGTATCACTTTAGTAAGTAACTATAACCAAGAAAAACACGTGCGTATGGCGTATGGCGAAACCGTCCAAC TCATGGGTTATGACTTTACCTTTAAGGGTGTAAGTAATGTTAAAGGGCCTAATTACACTGGCTATCAAGCGCATGTAGTG GCGAAACAAGACGGTGAAGTAGTCGCTAGCCTGGAAGCTGAAAAACGGATTTATACCGTGCAGCGCAATGTGATGACAGA GGCAGGAATTGATTCAAATATTCACCGCGACTTGTTTGTCGCACTTGGCGAGCAACTTGACGATGGCGATTGGGCTTTGC GCATCTACGTAAAACCGTTTGTAAATTGGATTTGGGCCGGCGCTTTCATCATGGGATTTGGTGGCATTTTGTCTATCTCA GATAAGCGTTATCGCATGCAGAAACTAGCTAGCAAGAAAGTTGCTAAAGACCAAACAAAACTGAACGCGCCACAGGTGCC AGCTTCTCAAGATGCAGTGGAGTCTCAATCATGA Protein sequence : MVAELGNISLVLALLMAISLAIYPLWGAQKDHLKLMQMAKPLAIGMFAFTLVAYICLTWAFVHDDFSLAYVASTSNSTLP LVYKYTAVWGGHEGSFLLWVMIFSIWTVAVALFSKAIELKMVARVLSILGMVAIGFYLFMLLTSNPFDVLLPFYPVDGRD LNPLLQDFGMIIHPPMLYMGYVGFSVAFAFALAALISGQLDSTWARWSRPWTIAAWSFLTVGIALGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALMHSLAVTEKRKVFKSWTVLLAIAAFSLSLLGTFLVRSGILVSVHSFASDPSRGLFILGLLV VVIGGSLLLFAIRAPQLKGAGRYKLFSREVMLAGNNVFLTAACLVVLLGTLLPLVHKELGLGSISIGAPFFNQMFSYLIV PFVLLMGIGPLSRWKNQAPSALYKQLLLAFGLSLSAAILVTANFEQTSYMAALGMVMGFWIVVTTIMEIHQRINADKKLS QQPIFSALAKLTPSHWGMVVGHLGFAVSIIGITLVSNYNQEKHVRMAYGETVQLMGYDFTFKGVSNVKGPNYTGYQAHVV AKQDGEVVASLEAEKRIYTVQRNVMTEAGIDSNIHRDLFVALGEQLDDGDWALRIYVKPFVNWIWAGAFIMGFGGILSIS DKRYRMQKLASKKVAKDQTKLNAPQVPASQDAVESQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-136 | 57 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-137 | 54 |
