Gene Information

Name : Patl_3254 (Patl_3254)
Accession : YP_662814.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 3903019 - 3903765 bp
Length : 747 bp
Strand : -
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: vfi:VF1822 heme chaperone heme-lyase

DNA sequence : 
ATGTGGAAATGGTTACATCCTTATGCGAAAACCCAAAATGCATACCAGCTATGTGAGCGCTTACTCCCTTGGTTTGTCAC
TTCATCGCTTATCTCTTTTAGCGTTGGGATGATATGGGGCCTTGCTTTTGCTCCCTCTGATTACCAGCAAGGGGATTCCT
TTCGCATAATCTATATTCACGTGCCTAGCGCGATCTTATCGATGGGTGCATACAGTGCGATGGCGATTTCAGCTTTTATC
GGTTTAGTCTGGCAGGTGCGTACCGCATTTATGGCCATGATAGCGCTCGCGCCAATTGGTGCAGTGGTAACCTTTATCGC
ATTGTTCACCGGCGCTGCTTGGGGGAAACCCATGTGGGGCACTTGGTGGGTGTGGGATGCGCGCTTAACCTCTGAGTTGA
TTTTGTTATTTTTGTACTTAGGCGTTATTTCCTTGTATGCCTCATTTGAGGATAAGCAGCAAGCAGGCAAAGCCGCAGGT
GTGATGGCACTGGTAGGCGTAATCAATTTGCCGATTATTCATTTTTCCGTGGAATGGTGGAATACCTTACACCAGGGCGC
GAGTATCACTAAATTCGATAAGCCATCCGTAGCGCCTGAAATGCTCTGGCCTTTGTTGATCAGCATCGTGGGACTGGCTT
TGGTGATGGGCGCAATATTTATTCGACGTTTACAGAACGAAATATTACGTCGTGAGCTGCATCGCCCTTGGGTTCAATCG
TTAGTTACTGAAACGAAGAGGAAGTAA

Protein sequence : 
MWKWLHPYAKTQNAYQLCERLLPWFVTSSLISFSVGMIWGLAFAPSDYQQGDSFRIIYIHVPSAILSMGAYSAMAISAFI
GLVWQVRTAFMAMIALAPIGAVVTFIALFTGAAWGKPMWGTWWVWDARLTSELILLFLYLGVISLYASFEDKQQAGKAAG
VMALVGVINLPIIHFSVEWWNTLHQGASITKFDKPSVAPEMLWPLLISIVGLALVMGAIFIRRLQNEILRRELHRPWVQS
LVTETKRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 1e-45 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Patl_3254 YP_662814.1 heme exporter protein CcmC VFG1856 Protein 8e-52 52