Gene Information

Name : Patl_3329 (Patl_3329)
Accession : YP_662889.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : D-erythrose-4-phosphate dehydrogenase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : -
Position : 3992605 - 3993633 bp
Length : 1029 bp
Strand : -
Note : KEGG: pha:PSHAa0594 D-erythrose 4-phosphate dehydrogenase; TIGRFAM: D-erythrose-4-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase dihydrodipicolinate reductase

DNA sequence : 
ATGATACGAGTAGCAATTAACGGTTTTGGTCGTGTTGGTCGCAACGTATTACGTGCGTTATACGAAACAGGGCAAAACAA
GCAAATACAAATTGTGGCGATCAATGAACTCGCCGAGCCTGAGGGCGTAGCACATCTATTAAAATATGATACTGCGCATG
GGCGTTTCCGTTTTCCTGTAGTGCTAGACAACCAACAGCTTGTGGTTGCTGGTGACCATATCACTTTATTGCAGCAAGAA
AATATTCGCGACCTGCCTTGGGCGCAACTTGATATTGATGTGGTTCTTGAGTGTACCGGTGTCAATAATGAGCGGGTTCA
CGGCGAACAACATATCGCTCAAGGGGCGAAAAAAGTGTTGTTTTCTCAGCCCTGTGGCCCAGATGTTGATGCAACGATTA
TTATGGGGATCAACGAGGAGTCTCTTAAAGCTAGCGATAGCATAGTATCTGCGGGTTCATGTACGACCAACTGCATCGTC
CCTGTCATTCAAGTACTCGATGAAGCATTTTCAGTTTCAAGTGGCACCATCACGACTATCCATTCATCCATGCACGATCA
ACAAGTGATAGATGCTTACCACCCAGATTTACGCCGAACTCGTGCCGCTAGCCAATCAATTATCCCAGTGGACACCAAAT
TAGCCCGGGGAATAGAGCGGGTTTTACCTAAGTTTGCAGGCAAATTCGAAGCCATCGCTGTGCGCGTGCCGACTATTAAC
GTTTCTGCAATGGATTTAAGCGTAACCCTTGATGCCAAAGTGACTATCGATGACGTGAACCAAGCGTTAAAAACGGTAAA
AAATGGGCGTTTGAATGGTATTTTAGATTTTACTGAAGAGCCTTTGGTGTCAGTGGATTTCAACCACGACGCACATTCTT
GCATCGTGGATGGCACACAAACGCGAGTGAGCCACAAACAACTGGTTAAATTACTGGTGTGGTGTGATAACGAATGGGGG
TTTTCAAACCGAATGATTGATATTGTACTCGTCATGAACACCTTATCGCTGGGCAATACGGGCAAATGA

Protein sequence : 
MIRVAINGFGRVGRNVLRALYETGQNKQIQIVAINELAEPEGVAHLLKYDTAHGRFRFPVVLDNQQLVVAGDHITLLQQE
NIRDLPWAQLDIDVVLECTGVNNERVHGEQHIAQGAKKVLFSQPCGPDVDATIIMGINEESLKASDSIVSAGSCTTNCIV
PVIQVLDEAFSVSSGTITTIHSSMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLARGIERVLPKFAGKFEAIAVRVPTIN
VSAMDLSVTLDAKVTIDDVNQALKTVKNGRLNGILDFTEEPLVSVDFNHDAHSCIVDGTQTRVSHKQLVKLLVWCDNEWG
FSNRMIDIVLVMNTLSLGNTGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 5e-107 61