Gene Information

Name : Patl_R0001 (Patl_R0001)
Accession : -
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 36085 - 37615 bp
Length : 1531 bp
Strand : +
Note : -

DNA sequence : 
AATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACATTTCTAG
CTTGCTAGAAGATGACGAGTGGCGGACGGGTGAGTAATACTTAGGAATATGCCTTTGTGTGGGGGATAACTATTGGAAAC
GATAGCTAATACCGCATAACGTCTTCGGACCAAAGGGGGCTTCGGCTCCCGCGCAAAGAGTAGCCTAAGCGAGATTAGCT
TGTTGGTGAGGTAAAGGCTCACCAAGGCGACGATCTCTAGCTGTTCTGAGAGGAAGATCAGCCACACTGGAACTGAGACA
CGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCCATGCCGCGTGTGT
GAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTTGTGAGGAAAGGTTAACGGTTAATACCCGTTAGCTGTGACGTTAGC
AACAGAAGAAGGACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTCCGAGCGTTAATCGGAATTACTGGGC
GTAAAGCGCACGCAGGCGGTTTGTTAAGCTAGATGTGAAAGCCCTGGGCTCAACCTGGGAATTGCATTTAGAACTGGCAG
GCTAGAGTTTTGGAGAGGGGAGTGGAATTCCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACATCAGTGGCGAA
GGCGACTCCCTGGTCAGTAACTGACGCTCATGTGCGAAAGTGTGGGTAGCGAACAGGATTAGATACCCTGGTAGTCCACA
CCGTAAACGCTGTCTACTAGCTGTTTGTGGATTTAATCCGTGAGTAGCGAAGCTAACGCGATAAGTAGACCGCCTGGGGA
GTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAA
CGCGAAGAACCTTACCTACTCTTGACATACTAGAAACTTTTCAGAGATGAATTGGTGCCTTCGGGAATCTAGATACAGGT
GCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGTCCTTAGTTGCC
AGCCTTAAGTTGGGCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCC
TTACGAGTAGGGCTACACACGTGCTACAATGGCGAGTACAGAGGGAAGCAAACTTGCGAGAGTAAGCGGATCCCTTAAAG
CTCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAAATCAGAATGTTGCG
GTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGCTAGTTTAACCT
TCGGGAGGACGGTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCCTAGGGGAACCTGGGGTTGG
ATCACCTCCTT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-180 87.5
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-180 87.5
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-180 86.8
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-180 86.8
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-180 86.7
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-180 86.7