Gene Information

Name : Patl_0550 (Patl_0550)
Accession : YP_660133.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG0217
EC number : -
Position : 640941 - 641672 bp
Length : 732 bp
Strand : -
Note : PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein

DNA sequence :
ATGGGCAGAAAGTTTGAAGTACGTAAGGTAGCGATGGCAAAAACTGCTGGCGCAAAAACCAAAGTTTACTCGAAATACGG
TAAAGAAATTTACATGGTTGCTAAGAACGGCGGCACAGACCCTCAAGCCAATTTGTCATTGCGCCGCCTTATCGATAAAG
CAAAAAAAGACCAAGTACCCAGCCACGTTATTGACAAAGCAATTGATAAAGCCGCTGGCGGTGCAGGTGAAGACTTCACC
CCAGCACGCTATGAAGGCTTTGGCCCAGGCGGCTGCATGGTTATCGTTGATTGCCTAACCGATAATAACAACCGAACTAT
CACAGATGTACGTAACTGTTTCACCAAAACAAACTCAAAAATAGGTGTGACAGGTACAGTAAGTCACATGTTTGACCATC
AAGCTGTGTTCTCTTTCCCTGGCGATGACGAAGACGCTGTTTTAGAAGTCTTAATGGAAGCGGACGTGGATGTAACGGAA
GTAGAATGTGAAGAGGGCGTGATCACGGTTTTTGCCCCTCATACTGAATACTTTAAAACCCGCACAGCACTAACCGATAA
CAACCCAGAACTTGAATTCGATGCAGATGAAATCACCTTTGTGCCGCAAACAGAAACAGTGGTAACAGGCGAAGATGTCG
CCACGTTTGATAAGTTTATGGATATGCTGGAAGATTGTGATGACGTGCAAGACGTATATCACAACGCTGTGGTTGAGCGC
GAAGGCGAATAA

Protein sequence :
MGRKFEVRKVAMAKTAGAKTKVYSKYGKEIYMVAKNGGTDPQANLSLRRLIDKAKKDQVPSHVIDKAIDKAAGGAGEDFT
PARYEGFGPGGCMVIVDCLTDNNNRTITDVRNCFTKTNSKIGVTGTVSHMFDHQAVFSFPGDDEDAVLEVLMEADVDVTE
VECEEGVITVFAPHTEYFKTRTALTDNNPELEFDADEITFVPQTETVVTGEDVATFDKFMDMLEDCDDVQDVYHNAVVER
EGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1069 YP_853086.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-46 48