|
Name : dnaQ (FTF0548) Accession : YP_666707.1 Strain : Francisella tularensis FSC 198 Genome accession: NC_008245 Putative virulence/resistance : Unknown Product : DNA polymerase III subunit epsilon Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0847 EC number : 2.7.7.7 Position : 566811 - 567503 bp Length : 693 bp Strand : + Note : Similar to Q83EK2 DNA polymerase III, epsilon subunit from Coxiella burnetii (232 aa). FASTA: opt: 699 Z-score: 870.8 E(): 1.3e-40 Smith-Waterman score: 699; 49.550 identity in 222 aa overlap DNA sequence : ATGTCACGACAAGTTTTTATAGATACTGAGACAACTGGCTTTGATTATAAGATTGGTAATAGAATTATTGAATTTGGTGC AGTTGAAGTTATTGATAGAAGGATAACAGGTAATAATTTACATTTTTATTGTAATCCAAATTATGAAGTTGAAGCTGGAG CTTTAGCTATTCATGGTCTTACAAATGAATTTCTAGCAGATAAACCTCTTTTTGAGGATAAAGTTGATGAGATGATTGAG TTTTTAAGAGGTGCTGAAGTAATCATTCATAATGCAGCTTTTGATGTGCCATTTATAAATTGGGAACTTAGTCTCTTAAA AAATAATAAATACGGAACATTAGAGCAAAATGTTGCTAAAATAGTAGATAGCCTTGATTTAGCTAGAAAAAAACATCCAT TACAAAAAAATAATCTTGATGCTCTATGTAAAAGATATCAAATTAGGAATGATCATCGTACCTTTCATGGTGCATTATTA GATAGTGAGCTGTTAGCGGATGTTTATCTAGCTATGACAGGTGGGCAGACTAATCTAAGTCTGCAAACAGCCAAAACTGT GAGCAAAAATAGTATTGATATTGATGTCAATAAACTAAACTTACGTAATGCTGAAGATAGTATTAGCGATATTTCTGCAC ACCATAGTTATCTTAGTAATTTGCTAAAACTAGAAGAAGATGCAAAATGGTAA Protein sequence : MSRQVFIDTETTGFDYKIGNRIIEFGAVEVIDRRITGNNLHFYCNPNYEVEAGALAIHGLTNEFLADKPLFEDKVDEMIE FLRGAEVIIHNAAFDVPFINWELSLLKNNKYGTLEQNVAKIVDSLDLARKKHPLQKNNLDALCKRYQIRNDHRTFHGALL DSELLADVYLAMTGGQTNLSLQTAKTVSKNSIDIDVNKLNLRNAEDSISDISAHHSYLSNLLKLEEDAKW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaQ | AAO17223.1 | DnaQ | Not tested | tcd island | Protein | 8e-42 | 44 |
