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Name : ECP_3037 (ECP_3037) Accession : YP_670921.1 Strain : Escherichia coli 536 Genome accession: NC_008253 Putative virulence/resistance : Virulence Product : general secretion pathway protein YghD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3149 EC number : - Position : 3197373 - 3197909 bp Length : 537 bp Strand : - Note : - DNA sequence : ATGTTACGCGATAAATTTATTCACTATTTTCAGCAATGGCGTGAACGCCAGTTAAGCCGTGGCGAACACTGGCTGACACA ACACCTGGCGGGGCGTTCTCCGCGTGAAAAAGGCATGTTACTGGCAGCGGTAGTGTTCCTGTTTAGCGCCGGATATTACG TTCTCATCTGGCAGCCGTTGAGCGAACGGATTGAGCAACAGGAGACGATGTTGCAGCAGTTGGTGGCGATGAACGCGCGA CTGAAGAGCGCCGCGCCGGATATTATTGCGGCGCGAAAATCCGGCACGACAACGCCAGCACAGGTATCGCGGGTCATCAG CGACAGCGCTTCCGCGCATTCTGTGGCCATTAAGCGAATAGCCGAGCGCGGGGAGAATATCCAGGTCTGGATAGATCCTG TGGTATTTAATGATCTGCTGAACTGGTTAAACGCACTGGATGAAAAATATGCGCTGCGGGTGACACAAATTGATGTCAGT GCTGCTGAGAAGCCTGGGATGGTGAATGTGCAGCGACTGGAATTTGGACGGGGGTAG Protein sequence : MLRDKFIHYFQQWRERQLSRGEHWLTQHLAGRSPREKGMLLAAVVFLFSAGYYVLIWQPLSERIEQQETMLQQLVAMNAR LKSAAPDIIAARKSGTTTPAQVSRVISDSASAHSVAIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDVS AAEKPGMVNVQRLEFGRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspM | CAE85225.1 | GspM, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-80 | 100 |
| gspM | YP_854398.1 | general secretion pathway protein YghD | Not tested | PAI I APEC-O1 | Protein | 3e-78 | 97 |
| yghD | CAI43907.1 | putative secretion pathway protein | Not tested | LEE | Protein | 4e-78 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECP_3037 | YP_670921.1 | general secretion pathway protein YghD | VFG2056 | Protein | 3e-57 | 94 |
