Gene Information

Name : ECP_3038 (ECP_3038)
Accession : YP_670922.2
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : GspL-like protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3297
EC number : -
Position : 3197911 - 3198771 bp
Length : 861 bp
Strand : -
Note : similar to general secretory pathway protein L

DNA sequence :
GTGATTCACCAGCAGCATATGCGCAACATTGCGCAGTGGTTGCAGGCAAACGGCATCACCCGCGCTATCGTCGCGCCGGA
CTGGATGTCCATTCCTTGTGGGTTTATGGCTGGCGATGCGCAACGGGTTATCTGCCGCATCGATGAATGCCGGGGATGGA
GTGCCGGGCTGGCGCTGGCTCCGGTCATGTTCCACGCCCAGCTCAATGAGCAGGATTTACCGCTTTCGCTAACCGTGGTC
GGCATTGCACCGGAAGAACTGTCTGCATGGGCTGGTGCGGACGCCGAACGCCTGACCGTTACGGCTCTGCCCGCCATTAC
CACTTATGGCGAACCGGAAGGGAACCTGCTAACAGGGCCGTGGCAGCCTCGTGTCAGCTACCGAAAACAGTGGGCGCGCT
GGCGGGTGATGATTCTGCCGATATTGCTGATTCTGGTTGCGCTGGTAGTGGAACGGGGCGTGACGTTATGGAGCGTCAGC
GAACAGGTGGCGCAAAGCCGCACCCAGGCGGAGAAACAGTTCTTAACGCTATTCCCGGAGCAGAAGCGGATTGTGAATTT
ACGCTCTCAGGTGACGATGGCGCTGAAAAAATATCGCCCACAGGCCGACGATACCCGGCTGCTCGCAGAATTGTCAGCGA
TCGCCAGTACTCTGAAAACGGCGTCACTTTCCGACATCGAGATGCGTGGTTTCACCTTTGATCAAAAACGCCAGACGCTT
CACCTCCAGCTGCGGGCCGCGAACTTTGCCAGTTTCGACAAACTGCGTAGTGCACTGGCGGCAGATTATGTTGTGCAACA
GGACGCGTTACAGAAAGAGGGTGATGCGGTTTCCGGCGGCGTAACGTTGCGGAGGAAATAA

Protein sequence :
MIHQQHMRNIAQWLQANGITRAIVAPDWMSIPCGFMAGDAQRVICRIDECRGWSAGLALAPVMFHAQLNEQDLPLSLTVV
GIAPEELSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALVVERGVTLWSVS
EQVAQSRTQAEKQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKTASLSDIEMRGFTFDQKRQTL
HLQLRAANFASFDKLRSALAADYVVQQDALQKEGDAVSGGVTLRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspL CAE85226.1 GspL, hypotehtical type II secretion protein Not tested PAI V 536 Protein 4e-122 99
gspL YP_854399.2 GspL-like protein Not tested PAI I APEC-O1 Protein 4e-120 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_3038 YP_670922.2 GspL-like protein VFG2055 Protein 4e-119 97