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Name : ECP_3047 (ECP_3047) Accession : YP_670931.1 Strain : Escherichia coli 536 Genome accession: NC_008253 Putative virulence/resistance : Virulence Product : type II secretion protein GspC Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3031 EC number : - Position : 3206875 - 3207834 bp Length : 960 bp Strand : - Note : part of the general (type II) secretion pathway (GSP), a signal sequence-dependent process responsible for protein export; involved in trans-location of exoproteins from the cytoplasm to the periplasm DNA sequence : TTGGCGCGGGTTATTTTTCGTGACGCACGAATTTATCTCATTCAATGGCTGACAAAAATTCGTCACACTCTTAACCAGAG ACAATCTCTTAATACAGACAAAGAGCATCTGCGCAAAATTGCACGCGGGATGTTCTGGCTGATGCTGCTTATTATTTCTG CAAAAGTGGCGCATTCACTCTGGCGCTATTTCTCCTTTTCTGCGGAATATACGGCGGTTTCCCCATCGGCGAATAAACCG CTCCGTGCGGATGCAAAAGCGTTCGATAAAAATGACGTGCAATTAATCAGCCAGCAAAACTGGTTTGGCAAATATCAGCC CGTCGCCACGCCGGTAAAACAACCCGAACCTGCACCTGTGGCCGAAACGCGTCTTAATGTGGTGTTGCGTGGGATCGCCT TTGGTGCCAGACCCGGCGCGGTTATTGAAGAAGGTGGTAAACAGCAGGTCTATTTGCAGGGTGAAACGCTTGGCTCGCAC AACGCAGTGATTGAGGAAATCAACCGCGACCATGTGATGCTGCGCTATCAGGGAAAAATAGAGCGCCTGAGCCTGGCTGA AGAGGAGCGTTCCACCGTTGCCGTGACCAACAAAAAAGCTGTCAGTGACGAAGCAAAGCAAGCTGTTGCTGAACCTGCTG TCAGTGCGCCAGTTGAGATCCCGGCTGCCGTGCGTCAGGCACTGGCGAAAGATCCGCAGAAAATTTTTAACTATATCCAG CTTACGCCTGTGCGTAAGGAGGGGATTGTCGGTTATGCAGTGAAACCGGGGGCAGATCGTTCTCTGTTCGATGCCAGCGG TTTTAAGGAAGGCGATATCGCCATTGCGCTAAATCAGCAGGATTTCACTGATCCACGAGCAATGATTGCTCTGATGCGGC AGTTACCTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGCGCGCTACGACATTTCCATCGCGCTGCGCTAA Protein sequence : MARVIFRDARIYLIQWLTKIRHTLNQRQSLNTDKEHLRKIARGMFWLMLLIISAKVAHSLWRYFSFSAEYTAVSPSANKP LRADAKAFDKNDVQLISQQNWFGKYQPVATPVKQPEPAPVAETRLNVVLRGIAFGARPGAVIEEGGKQQVYLQGETLGSH NAVIEEINRDHVMLRYQGKIERLSLAEEERSTVAVTNKKAVSDEAKQAVAEPAVSAPVEIPAAVRQALAKDPQKIFNYIQ LTPVRKEGIVGYAVKPGADRSLFDASGFKEGDIAIALNQQDFTDPRAMIALMRQLPSMDSIQLTVLRKGARYDISIALR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspC | CAE85235.1 | GspC, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-119 | 100 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECP_3047 | YP_670931.1 | type II secretion protein GspC | VFG2046 | Protein | 2e-113 | 95 |
