Gene Information

Name : ECP_0344 (ECP_0344)
Accession : YP_668277.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : MarR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 363400 - 363924 bp
Length : 525 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTTTCTTTTGCCGTGTGGTGGAATTATGAATAATATAGATTTATTAAAAACTATAACAAACTACAAAAAAATCAA
AAATCCGGCATACCCGGCTCAGGAGAGTCTGTTAATACACTTATATATTAGAGTAAATGACAAAATCCAGAGTATTATAG
AAAATGAATTGAGCGAGTATAGAATAAACACTTCAACATTTATGGTGTTAGTTTCATTATATATGTCTGATGATTATTGT
CAGTCCCCTTCTGATATTTACAAGGAGTTACAATTCTCCAAAACAAACATCACACACATCATAGACAAATTAGAAAAAAA
GAATATTGCCAAAAGAATTAATAATAAAAACGATCGTCGAAGCAAAAGTATTTGCTTAACCCCTGACGGAGTTACACTTG
CTCAAAAACTAATAAACACTCAAAATGTAATGCTAAAGAAAATCTGGAGCGGGCTATCAGATGATGAAATGAAAACATTT
GAACTCGCCAACAAAAAATTATTATCAAACCTTAATGTTAATTGA

Protein sequence :
MSFLLPCGGIMNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVLVSLYMSDDYC
QSPSDIYKELQFSKTNITHIIDKLEKKNIAKRINNKNDRRSKSICLTPDGVTLAQKLINTQNVMLKKIWSGLSDDEMKTF
ELANKKLLSNLNVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1713 YP_851471.1 hypothetical protein Not tested PAI III APEC-O1 Protein 3e-68 100
unnamed CAD66213.1 putative MarR-family transcriptional regulator Not tested PAI III 536 Protein 2e-68 100
prfX CAD42022.1 PrfX protein Virulence PAI II 536 Protein 4e-26 47
prsX CAD33722.1 PrsX protein Not tested PAI I 536 Protein 4e-26 47
sfaX CAC43423.1 SfaX protein Virulence PAI III 536 Protein 2e-26 47
fotX AAT48705.1 FotX protein Not tested PAI II 4787 Protein 1e-26 47
fooX AAT48696.1 putative regulatory protein Not tested PAI I 4787 Protein 6e-27 47
papX NP_755457.1 PapX protein Virulence PAI I CFT073 Protein 7e-25 46
ECUMN_3330 YP_002414008.1 putative HTH-type transcriptional regulator Not tested Not named Protein 7e-25 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_0344 YP_668277.1 MarR family transcriptional regulator VFG1688 Protein 9e-69 100
ECP_0344 YP_668277.1 MarR family transcriptional regulator VFG1541 Protein 2e-26 47
ECP_0344 YP_668277.1 MarR family transcriptional regulator VFG1649 Protein 8e-27 47
ECP_0344 YP_668277.1 MarR family transcriptional regulator VFG1463 Protein 2e-26 47
ECP_0344 YP_668277.1 MarR family transcriptional regulator VFG1713 Protein 2e-25 46