Gene Information

Name : ECP_3776 (ECP_3776)
Accession : YP_671648.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : MarR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 3958381 - 3958932 bp
Length : 552 bp
Strand : -
Note : -

DNA sequence :
ATGCGCGCTTGTACACTGACAGTGTGTTTCAGTAATATGGAGAATAATGAAATGAATAACACAGACACATTAGAAAAAAT
AATCAGACACCAAAAAAACAAAGACCCCGCATATCCCTTTCGGGAGCATTTGTTGATGCAACTCTGTATTCGCACAAATA
AAAGAATGCAGGATAATATATCTGAATTTCTGGGGGTGTATGGAATAAATCACTCAGTATATATGGTTCTCACCACATTA
TTCGCAGCGGAGAGTCATTGTCTGTCACCTTCAGAGATAAGCCAGAAACTTCAGTTTACCAGAACTAATATTACCCGCAT
TACAGATTTTTTAGAAAAAGCCGGATATGTAAAAAGGATGGATAGCAGGGAGGATCGCCGTGCTAAAAAAATCAGTCTGA
CATCTGAAGGTATGTTTTTTATTCAGAGGCTCACTCTTGCACAAAGCATGTATCTGAAAGAAATCTGGGGTTATCTGGCC
CATGATGAACAGGAACTGTTTGAAATCATTAATAAAAAATTACTGGCGCATCTTGATGATGTCAGCTCATAA

Protein sequence :
MRACTLTVCFSNMENNEMNNTDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGVYGINHSVYMVLTTL
FAAESHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRMDSREDRRAKKISLTSEGMFFIQRLTLAQSMYLKEIWGYLA
HDEQELFEIINKKLLAHLDDVSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prsX CAD33722.1 PrsX protein Not tested PAI I 536 Protein 4e-74 100
papX NP_755457.1 PapX protein Virulence PAI I CFT073 Protein 3e-77 99
ECUMN_3330 YP_002414008.1 putative HTH-type transcriptional regulator Not tested Not named Protein 3e-77 99
prfX CAD42022.1 PrfX protein Virulence PAI II 536 Protein 7e-74 99
sfaX CAC43423.1 SfaX protein Virulence PAI III 536 Protein 2e-72 96
fotX AAT48705.1 FotX protein Not tested PAI II 4787 Protein 1e-72 96
fooX AAT48696.1 putative regulatory protein Not tested PAI I 4787 Protein 3e-72 96
APECO1_1713 YP_851471.1 hypothetical protein Not tested PAI III APEC-O1 Protein 6e-31 46
unnamed CAD66213.1 putative MarR-family transcriptional regulator Not tested PAI III 536 Protein 4e-31 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_3776 YP_671648.1 MarR family transcriptional regulator VFG1463 Protein 2e-74 100
ECP_3776 YP_671648.1 MarR family transcriptional regulator VFG1713 Protein 8e-78 99
ECP_3776 YP_671648.1 MarR family transcriptional regulator VFG1541 Protein 3e-74 99
ECP_3776 YP_671648.1 MarR family transcriptional regulator VFG1649 Protein 1e-72 96
ECP_3776 YP_671648.1 MarR family transcriptional regulator VFG1688 Protein 2e-31 46