|
Name : ECP_3827 (ECP_3827) Accession : YP_671699.1 Strain : Escherichia coli 536 Genome accession: NC_008253 Putative virulence/resistance : Virulence Product : hemolysin A Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG2931 EC number : - Position : 3993570 - 3996644 bp Length : 3075 bp Strand : + Note : - DNA sequence : ATGCCAACAATAACCACTGCACAAATTAAAAGCACACTGCAGTCTGCAAAGCAATCCGCTGCAAATAAATTGCACTCAGC AGGACAAAGCACGAAAGATGCATTAAAAAAAGCAGCAGAGCAAACCCGCAATGCGGGAAACAGACTCATTTTACTTATCC CTAAAGATTATAAAGGACAGGGTTCAAGCCTTAATGACCTTGTCAGGACGGCAGATGAACTGGGAATTGAAGTCCAGTAT GATGAAAAGAATGGCACGGCGATTACTAAACAGGTATTCGGCACAGCAGAGAAACTCATTGGCCTCACCGAACGGGGAGT GACTATCTTTGCACCACAATTAGACAAATTACTGCAAAAGTATCAAAAAGCGGGTAATAAATTAGGCGGCAGTGCTGAAA ATATAGGTGATAACTTAGGAAAGGCAGGCAGTGTACTGTCAACGTTTCAAAATTTTCTGGGTACTGCACTTTCCTCAATG AAAATAGACGAACTGATAAAGAAACAAAAATCTGGTAGCAATGTCAGTTCTTCTGAACTGGCAAAAGCGAGTATTGAGCT AATCAACCAACTCGTGGACACAGCTGCCAGCATTAATAATAATGTTAACTCATTTTCTCAACAACTCAATAAGCTGGGAA GTGTATTATCCAATACAAAGCACCTGAACGGTGTTGGTAATAAGTTACAGAATTTACCTAACCTTGATAATATCGGTGCA GGGTTAGATACTGTATCGGGTATTTTATCTGTGATTTCAGCAAGTTTCATTCTGAGCAATGCAGATGCAGATACCGGAAC TAAAGCTGCAGCAGGTGTTGAATTAACAACGAAAGTACTGGGTAATGTTGGAAAAGGTATTTCTCAATATATTATCGCAC AGCGTGCAGCACAGGGGTTATCTACATCTGCTGCTGCTGCCGGTTTAATTGCTTCTGCTGTGACACTGGCAATTAGTCCC CTCTCATTCCTGTCCATTGCCGATAAGTTTAAACGTGCAAATAAAATAGAGGAGTATTCACAACGATTCAAAAAACTTGG ATACGATGGTGACAGTTTACTTGCTGCTTTCCACAAAGAAACAGGAGCTATTGATGCATCATTAACAACGATAAGCACTG TACTGGCTTCAGTATCCTCAGGTATTAGTGCTGCTGCAACGACATCTCTTGTTGGTGCACCGGTAAGCGCACTGGTAGGT GCTGTTACGGGGATAATTTCAGGTATCCTTGAGGCTTCAAAACAGGCAATGTTTGAACATGTCGCCAGTAAAATGGCCGA TGTTATTGCTGAATGGGAGAAAAAACACGGCAAAAATTACTTTGAAAATGGATATGATGCCCGCCATGCTGCATTTTTAG AAGATAACTTTAAAATATTATCTCAGTATAATAAAGAGTATTCTGTTGAAAGATCAGTCCTCATTACTCAGCAACATTGG GATACGCTGATAGGTGAGTTAGCTGGTGTCACCAGAAATGGAGACAAAACACTCAGTGGTAAAAGTTATATTGACTATTA TGAAGAAGGAAAACGTCTGGAGAAAAAACCGGATGAATTCCAGAAGCAAGTCTTTGACCCATTGAAAGGAAATATTGACC TTTCTGACAGCAAATCTTCTACGTTATTGAAATTTGTTACACCATTGTTAACTCCCGGTGAGGAAATTCGTGAAAGGAGG CAGTCCGGAAAATATGAATATATTACCGAGTTATTAGTCAAGGGTGTTGATAAATGGACGGTGAAGGGGGTTCAGGATAA GGGGTCTGTATATGATTACTCTAACCTGATTCAGCATGCATCAGTCGGTAATAACCAGTATCGGGAAATTCGTATTGAGT CACACCTGGGAGACGGGGATGATAAGGTCTTTTTAGCTGCCGGCTCAGCCAATATCTACGCAGGAAAGGGGCATGATGTT GTTTACTATGATAAAACAGATACCGGTTATCTGACCATCGATGGTACAAAAGCAACTGAAGCCGGTAATTACACGGTAAC ACGTGTACTTGGTGGCGATGTTAAGGTTTTACAGGAAGTTGTGAAGGAGCAGGAGGTTTCAGTTGGCAAAAGGACTGAAA AAACACAATATCGAAGCTATGAATTCACTCATATTAATGGCACAGACTTAACCGAGACAGATAACTTATACTCCGTGGAG GAGCTCATCGGAACCAACCGTGCTGATAAGTTTTTTGGCAGCAAATTTACAGATATCTTCCATGGCGCGGATGGTGATGA CCACATAGAAGGAAATGATGGGAATGACCGCTTATATGGTGATAAAGGTAATGACACACTGAGGGGCGGAAACGGGGATG ACCAGCTCTATGGCGGTGATGGTAACGATAAGCTAACCGGAGGTGTGGGTAATAACTACCTTAATGGCGGAGACGGGGAT GATGAGCTTCAGGTTCAGGGTAATTCTCTTGCTAAAAATGTATTATCCGGTGGAAAAGGTAATGACAAGCTGTACGGCAG TGAGGGGGCAGATCTGCTTGATGGCGGAGAAGGGAATGATCTCCTGAAGGGGGGGTATGGTAATGATATTTATCGTTATC TTTCAGGATATGGCCATCATATTATTGACGATGATGGGGGAAAAGACGATAAACTCAGTTTGGCTGATATTGATTTCCGG GACGTTGCCTTTAAGCGAGAAGGAAATGACCTCATCATGTATAAAGCTGAAGGTAATGTTCTTTCCATTGGTCATAAAAA TGGTATTACATTCAGGAACTGGTTTGAAAAAGAGTCAGGTGATATCTCTAATCACCAGATAGAGCAGATTTTTGATAAAG ATGGCCGGGTCATCACACCAGATTCCCTTAAAAAAGCATTTGAATATCAGCAGAGTAATAATCAAGCCAATTATGTGTAT GGAGAGTATGCATCAACTTATGCAGACCTGGATAATCTGAATCCATTAATTAATGAAATCAGCAAAATTATTTCAGCTGC AGGTAACTTCGATGTTAAGGAGGAAAGATCTGCCGCTTCTTTATTGCAGTTGTCCGGTAATGCCAGTGATTTTTCATATG GACGGAACTCAATAACTTTGACCGCATCAGCATAA Protein sequence : MPTITTAQIKSTLQSAKQSAANKLHSAGQSTKDALKKAAEQTRNAGNRLILLIPKDYKGQGSSLNDLVRTADELGIEVQY DEKNGTAITKQVFGTAEKLIGLTERGVTIFAPQLDKLLQKYQKAGNKLGGSAENIGDNLGKAGSVLSTFQNFLGTALSSM KIDELIKKQKSGSNVSSSELAKASIELINQLVDTAASINNNVNSFSQQLNKLGSVLSNTKHLNGVGNKLQNLPNLDNIGA GLDTVSGILSVISASFILSNADADTGTKAAAGVELTTKVLGNVGKGISQYIIAQRAAQGLSTSAAAAGLIASAVTLAISP LSFLSIADKFKRANKIEEYSQRFKKLGYDGDSLLAAFHKETGAIDASLTTISTVLASVSSGISAAATTSLVGAPVSALVG AVTGIISGILEASKQAMFEHVASKMADVIAEWEKKHGKNYFENGYDARHAAFLEDNFKILSQYNKEYSVERSVLITQQHW DTLIGELAGVTRNGDKTLSGKSYIDYYEEGKRLEKKPDEFQKQVFDPLKGNIDLSDSKSSTLLKFVTPLLTPGEEIRERR QSGKYEYITELLVKGVDKWTVKGVQDKGSVYDYSNLIQHASVGNNQYREIRIESHLGDGDDKVFLAAGSANIYAGKGHDV VYYDKTDTGYLTIDGTKATEAGNYTVTRVLGGDVKVLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGTDLTETDNLYSVE ELIGTNRADKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGDGD DELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGHHIIDDDGGKDDKLSLADIDFR DVAFKREGNDLIMYKAEGNVLSIGHKNGITFRNWFEKESGDISNHQIEQIFDKDGRVITPDSLKKAFEYQQSNNQANYVY GEYASTYADLDNLNPLINEISKIISAAGNFDVKEERSAASLLQLSGNASDFSYGRNSITLTASA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyA | CAD42039.1 | HlyA protein | Virulence | PAI II 536 | Protein | 0.0 | 99 |
| hlyA | CAD33759.1 | hemolysin A | Virulence | PAI I 536 | Protein | 0.0 | 99 |
| hlyA | NP_755445.1 | hemolysin A | Virulence | PAI I CFT073 | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECP_3827 | YP_671699.1 | hemolysin A | VFG1500 | Protein | 0.0 | 99 |
| ECP_3827 | YP_671699.1 | hemolysin A | VFG1558 | Protein | 0.0 | 99 |
| ECP_3827 | YP_671699.1 | hemolysin A | VFG0906 | Protein | 0.0 | 98 |
| ECP_3827 | YP_671699.1 | hemolysin A | VFG0840 | Protein | 0.0 | 62 |
