Gene Information

Name : Meso_0899 (Meso_0899)
Accession : YP_673461.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1138
EC number : -
Position : 988714 - 990702 bp
Length : 1989 bp
Strand : +
Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: mlo:mlr7690 cytochrome c-type synthesis protein cycK

DNA sequence :
ATGAGCGTCGAACTTGGCCATTTCGCACTCGTGCTGGCGCTGGCGCTGGCCTTGGTGCAGGCGCTGGTGCCGCTCCTCGG
CGCGCGCTTGGGCAGCGCTCCGCTGATGCGGATGGGCGAACCGGTGGCCATTACCGGGTTTGCGCTGATCGCGTTCGCCT
TCGCGGCGCTGGTGCTTGCCTATGTCCAATCGGATTTCTCGGTGCTGAATGTGTGGGAGAACTCACACTCGGCCAAGCCG
CTTCTGTTCAAGATTACCGGGACTTGGGGCAATCATGAAGGCTCGATGCTCCTTTGGGTGCTGATCCTAGCCTTTTTCGG
GGCTCTTGTGGCAGCCTTCGGCCAGAATCTGCCGCCAACGCTCAGGGCCAATGTGCTGGCCATACAGGGCCTGATTGCCA
GCGCCTTCCTCCTGTTCATCCTCTTTACCTCCAATCCCTTCATCCGCCTTGAGCGGGCGCCGATTGAAGGCCGTGACCTC
AATCCGATCCTGCAGGACATCGGGCTCGCGATCCATCCGCCGCTGCTCTATCTCGGCTATGTGGGGTTCTCGATCTCCTT
TTCGTTCGCGGTGGCGGCGCTGATCGACGGGCGCCTGGACGCGGCTTGGGCACGGTGGGTGCGTCCGTGGACGCTCGTTG
CCTGGGCCTTCCTCACCGGCGGCATCGCGATGGGCTCCTACTGGGCCTATTATGAATTGGGATGGGGCGGCTTCTGGTTC
TGGGACCCGGTGGAGAACGCTTCCCTGATGCCCTGGCTGGCGGGTACGGCGTTGCTGCACTCGGCCATTGTCATGGAAAA
GCGCTCGGCACTGAAAATCTGGACGGTGCTGCTGGCCATTCTCACTTTTTCGCTGTCGCTGCTTGGCACATTTCTGGTCC
GCTCGGGCGTTTTGACCTCTGTTCACTCCTTTGCGACAGATCCCACACGCGGCGTCTTCATTCTTGCGATACTGGTGTTC
TTTATCGGCGGCGCTCTGGCTTTGTTTGCAGTAAGGGGCGCGTCGCTCGCGCCGGGTGGACTGTTCCATCCCATTTCCAG
GGAGGGGGCGCTTGTCTTCAACAATCTGATGCTTACGACCGCGGCGGCGACGGTGCTCATCGGCACTCTCTACCCCCTGC
TGATCGAGGCCATCAGCGAAGACAAGATTTCCGTCGGCGCGCCGTTCTTTAATCTGACCTTCGTGCCGCTGTTCCTGCCG
CTCCTGCTGGCCGTGCCTTTTGGGCCGCTTCTCGCCTGGAAGCGCGGCGATCTGCCAGGAGCTCTCCAGCGCCTGCAATT
CGCGTTCTGGGCAGCCGGGGCGGCCGCAATCGCGAGCTATTTCCTGATTGACCGCGCCAACGCCGCAGCTGCGCTCGGCA
TCGGCCTGGGGCTGTGGCTTGTCTTCGGCGCGCTGACAGATCTCGCTTTCAAATCCGGCATCGGCAAGGTCGGGCCAGCA
CTTGCCCTTCGCCGGCTCTCCGGCTTGCCCCTTTCGATGTTCGGCACCTGTTTCGCACATGCCGGGCTGGGCCTTACCGT
GCTCGGCATTGTCTCCGTCACCGCGCTTCAGGCCGAGAAAATCCTGACAATGCAGCCAGGCCAGAGCACCGAAATCAGCG
GCTACACTCTTCGCTTCGTGGATCTGCGGCCCTTCACCGGCCCAAATTACACGGAAGACCGCGCCGAGTTCGCGCTCGGG
ACCACCCGCGGTGCGTCGCTGGGGGAACTCGTTTCGTCCAAGCGTCTTTATACGGCCCGGGGTATGCCGACGACCGAAGC
CGGCATCAGAACGATGGGCCTGAGCCAGCTCTATGTTTCGATCGGTGACCGTACACCGGCTGGGCTCGTCGTGCGGATCT
GGTGGAAGCCTTTCGTCACGCTGATCTGGGCCGGTGCGCTGGTGATGATGGGCGGCGGCTTCATCTCTCTCATGGACCGC
AGGCTGCGCGTCGGTGCGCCGGCAAGGCGCAAAGCAGCGCTCGCGGCGGACGGTGGGGGAACGCGATGA

Protein sequence :
MSVELGHFALVLALALALVQALVPLLGARLGSAPLMRMGEPVAITGFALIAFAFAALVLAYVQSDFSVLNVWENSHSAKP
LLFKITGTWGNHEGSMLLWVLILAFFGALVAAFGQNLPPTLRANVLAIQGLIASAFLLFILFTSNPFIRLERAPIEGRDL
NPILQDIGLAIHPPLLYLGYVGFSISFSFAVAALIDGRLDAAWARWVRPWTLVAWAFLTGGIAMGSYWAYYELGWGGFWF
WDPVENASLMPWLAGTALLHSAIVMEKRSALKIWTVLLAILTFSLSLLGTFLVRSGVLTSVHSFATDPTRGVFILAILVF
FIGGALALFAVRGASLAPGGLFHPISREGALVFNNLMLTTAAATVLIGTLYPLLIEAISEDKISVGAPFFNLTFVPLFLP
LLLAVPFGPLLAWKRGDLPGALQRLQFAFWAAGAAAIASYFLIDRANAAAALGIGLGLWLVFGALTDLAFKSGIGKVGPA
LALRRLSGLPLSMFGTCFAHAGLGLTVLGIVSVTALQAEKILTMQPGQSTEISGYTLRFVDLRPFTGPNYTEDRAEFALG
TTRGASLGELVSSKRLYTARGMPTTEAGIRTMGLSQLYVSIGDRTPAGLVVRIWWKPFVTLIWAGALVMMGGGFISLMDR
RLRVGAPARRKAALAADGGGTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 3e-86 47
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 3e-71 47