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Name : cobT (SFV_2063) Accession : YP_689496.1 Strain : Shigella flexneri 8401 Genome accession: NC_008258 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG2038 EC number : 2.4.2.21 Position : 2083000 - 2084079 bp Length : 1080 bp Strand : - Note : catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole DNA sequence : ATGCAAATAATTGCCGATTTACTGAATACGATCCCAGCCATCAATTCTGCCGCTATGTCGCGTGCACAACGGCATGTTGA CGGGTTATTCAAACCTGTTGGTAGCCTAGGAAAGCTGGAGGCGCTTGCCATACAACTGGCAGGAATGCCGGGGGTGAATG GCATACCGCATGTGGGCAAAAAAGCGGTACTGGTTATGTGTGCCGATCACGGCGTCTGGGAGGAAGGGGTCGCTATTTCT CCAAAAGAAGTGACAGCCATACAGGCTGAAAATATGACCCGTGGAACAACCGGCGTGTGTGTGCTGGCAGCACAAGCGGG CGCTAACGTCCACGTAATTGATGTTGGTATTGATACTGCTGAGCCTATCCCCGGGCTTATCAACATGCGTGTCGCACGAG GTAGCGGCAATATTGCTTCAGCTCCGGCAATGAGTCGCCGTCAGGCTGAAAAGTTGCTTTTGGACGTCATATGTTATACG CGGGAGCTGGCGAAAAACGGTGTCACGCTGTTTGGTGTAGGTGAACTGGGGATGGCAAACACGACACCGGCAGCGGCAAT AGTCAGCACAATCACTGGCCGGGATCCTGAAGAAGTGGTTGGGATTGGCGCAAACCTGCCGACAGATAAACTGGCTAATA AAATTGATGTTGTGCGTCGGGCGATTACGTTGAATCAACCAAATCCTCAGGATGGTGTTGATGTCCTGGCAAAAGTGGGT GGATTTGATTTGGTCGGAATAGCTGGAGTGATGTTAGGTGCTGCTTCCTGCGGTTTACCCGTGTTGCTGGATGGATTTCT TTCTTATGCTGCTGCGCTCGCAGCCTGCCAGATGTCTCCTGCAATCAAACCGTATCTCATTCCTTCTCACTTGTCGGCAG AAAAAGGCGCGCGTATAGCGCTCTCGCATTTGGGGCTGGAGCCTTATCTCAATAGGGATATGCGTATAGGTGAGGGGATT GTGCAAGCTCTGGCGATGTCCATCATCGAAGCTGCTTGTGCGATATACAACAACATGGGCGAACTTGCTGCCAGTAATAT TGTTCTACCGGGGAATACGACTTCTGATTTGAACAGCTAA Protein sequence : MQIIADLLNTIPAINSAAMSRAQRHVDGLFKPVGSLGKLEALAIQLAGMPGVNGIPHVGKKAVLVMCADHGVWEEGVAIS PKEVTAIQAENMTRGTTGVCVLAAQAGANVHVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRRQAEKLLLDVICYT RELAKNGVTLFGVGELGMANTTPAAAIVSTITGRDPEEVVGIGANLPTDKLANKIDVVRRAITLNQPNPQDGVDVLAKVG GFDLVGIAGVMLGAASCGLPVLLDGFLSYAAALAACQMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNRDMRIGEGI VQALAMSIIEAACAIYNNMGELAASNIVLPGNTTSDLNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 4e-159 | 95 |
