|
Name : SFV_0314 (SFV_0314) Accession : YP_687893.1 Strain : Shigella flexneri 8401 Genome accession: NC_008258 Putative virulence/resistance : Unknown Product : Rhs family protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 329794 - 332007 bp Length : 2214 bp Strand : - Note : Code: S; COG: COG3501 DNA sequence : ATGAGTTTTGTATCTACGGGTAATAAACCAGTTGGAAACGGTGGACCCGTCATCACCACACCACCAATAGCTGGCGAAAG TGGCGGTATGAGCACAGGTTCAGCTGTAACCGATGTATCTGGTGCCGCCGAGGAGATGGCAGAACAGGCAGCGGCGGACC TGTTTGGTGCGCTGCCGGAACCGTCAGGTCTGGTTAAAGCCGCAGTAGCTGCTGCGCAGGCTGCCGCTGCAGCAGCAGGG ATCTCGGATATGGCTGGTGCAGTTCAGGATGCAGCGGCGTCGCTTGCAGCCGGTGCTCCGGGGGCGCATAACGTCACAGT AAGTGGTAGTGCGGTGCCGCCGCAGATGCTTTTGTTTGCGGGCATGAATGGTTCGGAAGGGCTTGGGAATCTGTTTTCTT ACACAGTACAGCTTAAAACGCTGGACGCCCTGAACCTGGGGTACGTTTCCCCCGCTGCTAACCTGCCGCTTCAGCTCATG GTGGGCAAAGACCTGTGCGTCAGTATCGAACTGGACGGCGGCGGAAAACGGTATATCAGCGGGCTGGTGACGGCGGCGAG GGTGGTCGGCCATGAGGGCCGTTCGGTAACGTATGAATTACGCATTGAGCCATGGCTGAAGCTGCTGACCCATACCAGCG ACTACAAAGCGTTCCAGAACAAAACCGTGGTGGATATTCTCGATGAAGTACTGGATGAATATTCCTTTCCGGTGGAAAAG CGGCTGGTGGAAAATTATCCACCCCGCGCCTGGCAGGTGCAGTATGGTGAAACCGACTTCGATTTCATCCAGCGCCTGAT GCAGGAATGGGGGATTTACTGGTGGTTTGAGCACAGCGAGAACAGCCACACGCTGGTGCTGGTGGATGCCATCAATGGTC ATAAAGCGTGCCCTGACTCGCCGCTGGTGGAGTGGCACCAGGAAGGGCTGAAACTGGATAAGGAATTTATCCACACCATT ACGGCCAGTGAGAGGCTGCGTACTGGAAAGTGGGTGATGGACGATTTTGATTTTATGAAGCCTCGTTCGCTGCTTAAAAG TACCGTGGCCAGTCCGCGTGATACCGGTCATGCTGAATACGAGCATTACGAATGGCCTGGTGATTACTTCACTACGGGCG AAGGCGAGATGCTGACGCGCATTCGTATGGAAGCGCAGCGCAGCCCTGGCAGCCGGGCACATGGGGCCGGTCATATCCGT ACCCTCATGACCGGGTACACCTTTACGTTGATGAATCACCCGACGGCAGAAATTAATCAGGAATATCTGCTGGTACAGAC CACTCTGTTTTTACGGGATAATGCGCAGCACAGCGGTCAGGATCAGCATTTTACCTATGTCACCACGTTTGAACTGCACC CCACCAGCGAAGTTTACCGCCCACAACGAACCCTGAGCAAACCCCACACCAAAGGCCCGCAGAGCGCCATCGTCACCGGC CCGGCGGGGCAGGAAATCTGGACGGATAAATATGGCCGGGTGAAGGTGCAGTTTGGCTGGGACCGTTACGGAAAGAATGA CGAAAACAGTTCCTGCTGGATCCGCGTCAGCTATCCGTGGGCGGGTAAAGGATTCGGCATGATCCAGATCCCGCGTATTG GCCAGGAAGTACTGGTGGATTTCAAAAACGGCGATCCGGATTTGCCCATCATCGTGGGGCGCACCTATAACCAAGACACC ATGCCGCCGTGGGGGCTGCCGGGCATGGCGTCGCAGAGTGGGATATTCAGCCACTCATTGCAGGGAGGGCCGACTAACGG AAATATGCTGCGCTTCGATGATAAAACGGGTGCGGAAGAGGTGAAGTTCCATGCGGAAAAAGACCTCAATACCACGGTAA AAAACAATGAAACCCACACGGTCATGGTCGATCGCATAAAAACCATTGTCAAAAATGAAACCATCAGCGTGGGAGAAGAC CGTAATGCCACCATCACAAAAAATGATGGTCTTTCCGTCAAACTGGCTCAAACCATCAATGTCGGAACGACATATCGTCT GGATGTTGGCGATCAATTTACCCTTCGTTGCGGCAATGCAGCGCTTGTATTACACAAGGATGGCTCGATTGAGTTTTGCG GAAAACAACTGTTACTGCACACCAGCGATGTTATGCAACTCATTGGCAGTGGCATTGATATGAATCCGGATGGCGGCACA GCCATGACTGCGGATGATATTGCCCCGTTACCTACCCCCGACGTTTCTGAATAA Protein sequence : MSFVSTGNKPVGNGGPVITTPPIAGESGGMSTGSAVTDVSGAAEEMAEQAAADLFGALPEPSGLVKAAVAAAQAAAAAAG ISDMAGAVQDAAASLAAGAPGAHNVTVSGSAVPPQMLLFAGMNGSEGLGNLFSYTVQLKTLDALNLGYVSPAANLPLQLM VGKDLCVSIELDGGGKRYISGLVTAARVVGHEGRSVTYELRIEPWLKLLTHTSDYKAFQNKTVVDILDEVLDEYSFPVEK RLVENYPPRAWQVQYGETDFDFIQRLMQEWGIYWWFEHSENSHTLVLVDAINGHKACPDSPLVEWHQEGLKLDKEFIHTI TASERLRTGKWVMDDFDFMKPRSLLKSTVASPRDTGHAEYEHYEWPGDYFTTGEGEMLTRIRMEAQRSPGSRAHGAGHIR TLMTGYTFTLMNHPTAEINQEYLLVQTTLFLRDNAQHSGQDQHFTYVTTFELHPTSEVYRPQRTLSKPHTKGPQSAIVTG PAGQEIWTDKYGRVKVQFGWDRYGKNDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDT MPPWGLPGMASQSGIFSHSLQGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRIKTIVKNETISVGED RNATITKNDGLSVKLAQTINVGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLLLHTSDVMQLIGSGIDMNPDGGT AMTADDIAPLPTPDVSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0319 | NP_454896.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 0.0 | 85 |
