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Name : cspE (SFV_0702) Accession : YP_688247.1 Strain : Shigella flexneri 8401 Genome accession: NC_008258 Putative virulence/resistance : Unknown Product : cold shock protein CspE Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 737507 - 737800 bp Length : 294 bp Strand : - Note : member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator DNA sequence : TTGCACTGGACAAAGCGTACCACAATTGGTGTACTGATAACCGACACAGCATTTGTGTCTATTTTTCATGTAAAGGTAAT TTTGATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCA GCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTC GAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAA Protein sequence : MHWTKRTTIGVLITDTAFVSIFHVKVILMSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEF EITNGAKGPSAANVIAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 2e-19 | 70 |
