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Name : secF (ABO_0504) Accession : YP_692224.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 553868 - 554791 bp Length : 924 bp Strand : + Note : (protein-export membrane protein SecF) identified by match to PFAM protein family HMMPF03631 InterPro: SecD/SecF/SecDF export membrane proteins; High confidence in function and specificity DNA sequence : ATGAGTAAAGCACCCATGAACATCAATTTTATGGCCGCCCGCAAACCGCTGGGTGTTCTGTCGCTGGCGTTGGTAATTAT TTCCGTCGTATTGTTGCTGACCCGAGGGCTCAACCTGGGCTTGGACTTTACCGGTGGTACGACGGTCGTGGTGAAAAGCC CGACAGATGTGGAGCTGTCCCAAGCCCGTGATGATCTTACTGAGGCCGGCTTCGGCGATGCCGTTGTGCAGCATTACGGC TCACCTAAGGAGGTGAATATCCGTGTTGCACCCAAGGACGATGCGGATGCGGATAAAGTCGGCCAGAATGTCTTCAATGT GCTTAAAGAGCACAATGCAGATCTGGAACTACTGAAAGTAGAGTTTGTTGGTCCTCAGGTGGGTGACGAACTTCGTGATG AATCCGGCACCGCCATGCTATTGGCCCTTGGCTTGATGATGCTGTACGTGTGGTTTCGGTTCTCCAACAAGTTCGGTGTA GCTACCGTACTTGCACTGTTTCACGATGTGATCATTGTGCTGGGGTTGTTTGCACTGATTCAGTGGCCTTTCGACCTGAC GGTGCTGGCGGCGGTGCTGGCGCTGATCGGTTACTCGCTTAACGACTCCATCGTGGTGGCTGACCGGATACGGGAAGATT TTCGCAGTACCCGGGAGACGGATCCGGTGGCTATCATTAATGGTGCGGTGAACCAGACCTTTACCCGGACGATTAACACC TCGGTTACTACTTTGCTGGTATTGGTGGCGTTGTACTTCTTTGGTGGCGAAGTGATGCGAGCTTTCTCTGAGGCATTGCT GGTGGGGGTTTTAGTGGGTACCTATTCGTCCATCTATGTGGTGAGCAACATCCTCTTCATGATGAAGGTCAGCAAGGAAG ACTTTATGATTCCGGAGCCGGAAGAAGTGGATGAAATGCCGTAA Protein sequence : MSKAPMNINFMAARKPLGVLSLALVIISVVLLLTRGLNLGLDFTGGTTVVVKSPTDVELSQARDDLTEAGFGDAVVQHYG SPKEVNIRVAPKDDADADKVGQNVFNVLKEHNADLELLKVEFVGPQVGDELRDESGTAMLLALGLMMLYVWFRFSNKFGV ATVLALFHDVIIVLGLFALIQWPFDLTVLAAVLALIGYSLNDSIVVADRIREDFRSTRETDPVAIINGAVNQTFTRTINT SVTTLLVLVALYFFGGEVMRAFSEALLVGVLVGTYSSIYVVSNILFMMKVSKEDFMIPEPEEVDEMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 5e-43 | 46 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 4e-43 | 46 |
