Gene Information

Name : gap (CPF_1511)
Accession : YP_695954.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Unknown
Product : glyceraldehyde-3-phosphate dehydrogenase, type I
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : 1.2.1.-
Position : 1726753 - 1727751 bp
Length : 999 bp
Strand : -
Note : identified by similarity to SP:Q59309; match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534

DNA sequence :
ATGGTAAAAGTAGCTATTAACGGATTTGGAAGAATAGGAAGATTAGCGTTAAGATTAATGATCGACAACCCTGAGTTTGA
GGTTGTAGCAATCAACGACTTAACTGATGCTAAGACTTTAGCACACTTATTCAAATACGATTCAGCACAAGGAAGATTCA
ATGGTGAAATAGAAGTTAAAGAAGGAGCTTTCGTAGTTAACGGAAAAGAAATCAAAGTAACTGCTAAAAGCAACCCTGCT
GAATTACCATGGGGAGAATTAGGAGTAGACGTAGTATTAGAGTGTACTGGATTCTTCGCATCAAAAGAGAAAGCTTCAGC
TCACTTAACTGCTGGTGCTAAAAAAGTTGTTATCTCAGCTCCTGCTGGAAACGACCTACCAACAGTTGTTTACAACGTAA
ACCACGACATATTAGATGGAAGCGAAGATGTTATCTCAGGTGCTTCATGTACTACAAACTGCTTAGCTCCAATGGCTAAA
GCTTTAAATGATAACTTCGGATTAAACAAAGGTTTCATGACTACAATCCACGCTTACACTAATGACCAAAACACTTTAGA
TGCTCCACACAAAAAAGGAGACTTAAGAAGAGCTAGAGCTGCTGCTGCTAACATAGTTCCAAACTCAACTGGAGCTGCTA
AAGCTATCGGTTTAGTTATCCCAGAATTAGCTGGTAAATTAGACGGAAACGCTCAAAGAGTACCTGTAATAACTGGTTCA
TTAACTGAGTTAGTTTGTACTTTAGATAAAAAAGTAACAGTAGAAGAAGTAAACGCTGCTATGAAAGCTGCTTCAAACGA
ATCATTCGGATACACTGAAGATCCAATAGTATCATCAGACGTTATCGGAATAAGCTTCGGATCATTATTCGATGCTACTC
AAACTAAAATAATGGAAGTTGACGGACAACAATTAGTTAAAGTTGCTTCATGGTATGACAACGAAGCTTCATACACTAAC
CAATTAATCAGAACTTTAAAATGCTTAGTTTCTAAGTAA

Protein sequence :
MVKVAINGFGRIGRLALRLMIDNPEFEVVAINDLTDAKTLAHLFKYDSAQGRFNGEIEVKEGAFVVNGKEIKVTAKSNPA
ELPWGELGVDVVLECTGFFASKEKASAHLTAGAKKVVISAPAGNDLPTVVYNVNHDILDGSEDVISGASCTTNCLAPMAK
ALNDNFGLNKGFMTTIHAYTNDQNTLDAPHKKGDLRRARAAAANIVPNSTGAAKAIGLVIPELAGKLDGNAQRVPVITGS
LTELVCTLDKKVTVEEVNAAMKAASNESFGYTEDPIVSSDVIGISFGSLFDATQTKIMEVDGQQLVKVASWYDNEASYTN
QLIRTLKCLVSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 2e-62 43