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Name : clpB (CPF_1681) Accession : YP_696119.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Virulence Product : clpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.- Position : 1898873 - 1901473 bp Length : 2601 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGAATGCAGATAAAATGACATTAAGAGTACAACAAAGCTTAAATGATGCTTATGAAATAGCAGTTAAATATAATAATCA ACAATTAGATATAATTCACTTATTTTCAGCATTAGTAAATCAAAAAGATGGTTTAATTCCTAATATATTTGAAAAAATGG GTGTTAATATAGATTCATTAAAAAGAGACATTCATGTTCAAATAGATAGGATGCCTAAGGTTTTAGGAGAAGCGGCACAA TCATCAGGGGTTACTGCTACAAGAAGAATAAATGAAGTATTAATAAAGGCAGAAGAAATTTCAAAACAATTTGAAGATTC ATATATAAGTGTTGAGCATGTAATGCTTGCAATGATAGATATAGATAAAAATGGAGCTGTAGGAGAAATCTTAAGAAAAA ATAATATAACTAAAGATGGATTCCTAAAGGTTTTAAATGAAGTTAGAGGAAGTCAAAGAGTAGATTCACAAGATCCAGAA GGAACTTATGAAGCTTTAGATAAATACGGTACTAATTTAATAGAACTTGTAAAACAACATAAATTAGATCCTGTTATAGG AAGAGATGAAGAAATAAGAAGAGCTGTTAGAATTCTTTCAAGAAAAACTAAGAACAATCCAATACTAATAGGAGAACCTG GAGTTGGTAAAACTGCTATAGTTGAAGGATTAGCAGAAAGAATTGTAAGAGGAGATGTACCAGAAGGACTAAAGGATAAG GTAATTATCTCATTAGATATGGGTGCATTAATAGCTGGTGCTAAATATAGAGGAGAATTTGAAGAAAGATTAAAAGCTGT TTTAAAAGAAGTTCAAAGTTCAGAAGGAAAAATACTTTTATTCATAGATGAAATTCATACAATTGTAGGCGCTGGTAAAA CAGATGGTGCAATGGATGCAGGAAACTTAATTAAACCAATGCTTGCAAGAGGAGAACTTCACTGCATAGGAGCTACAACT TTTGACGAATATAGACAATATATAGAAAAGGATAAAGCTCTAGAGAGAAGATTCCAACCTGTAATAGTTGAAGAACCAAC AGTTGAAGAAACTGTATCTATTTTAAGAGGATTAAAAGAAAGATTTGAAATTCACCATGGAATTAGAATCCATGACTCAG CAATAGTAGCTGCTGCAAAACTTTCTCATAGATATATTCAAGATAGATATTTACCAGATAAGGCTATAGATTTAATAGAT GAAGCTGGTGCTATGATAAGAAGTGAAATAGATTCTCTTCCAACTGAATTGGATATTATAAGAAGAAAGATCTTAATGCT TGAAACTGAAAAGGAAGCTTTATCAAAAGAAAATGATGATGCATCTAAGGAAAGATTAGTTGCTTTAGAAAAAGAGCTTG CAGAGCTTCAAGATAAAAATGATGAGATGACAATTAAATATGAAAAAGAAAAATCTCATATTTCAGCAGTTAGAGACTTA AAGGCTGAGTTAGATGAAGCAAGAGGATTAGCTGAAAAATATGAAAGAGAATATGATTTAAATAAAGTTGCAGAACTTAA ATATGGAAAAATTCCAGAACTTGAACGTAAAATAAAAGAACAAGAAGCAAGTATGGAAAAAGATAATGAAAATGCTTTAT TAAAAGAAGAGGTTACTGAAAATGAAATTTCAGAAATAATCTCAAAATGGACTGGAATTCCTGTTACAAAACTAGTTGAA AGTGAAAGAGAAAAACTTTTAAGACTAGAAGAAGAATTAAGAGAAAGAGTAATAGGTCAAGATGAGGCTACAACTGCAGT TGCTAATGCTGTAATAAGAGCAAGAGCTGGTCTTAAAGATGAAAGAAAACCAATAGGATCATTTATATTCTTAGGACCTA CTGGAGTTGGTAAAACAGAACTTGCAAAAACTTTAGCTAGAAATTTATTTGATAGCGAAGACAATATAGTAAGAATAGAT ATGTCTGAATATATGGAAAAACATGCAGTATCTAGATTAATAGGACCTCCTCCAGGATATGTAGGATATGAAGAAGGGGG ACAATTAACAGAGGCTGTTAGAAGAAACCCATATTCAGTAATATTATTTGATGAAATAGAAAAAGCACATGATGATGTAT TTAACTTATTCCTTCAAATATTAGATGATGGTAGATTAACAGATAATAAAGGTAAAACTGTTGATTTCAAAAACACTATA ATAATTATGACTTCTAACATAGGTAGTGGATACTTATTAGAAAATAAATCTAATGAAGGTATAGAAGATGATATTAGAGA AAATGTTATGAATGAAATGAAGTTAAGATTCAAACCAGAATTCTTAAACAGAGTAGATGATATCATAATGTTTAGACCTT TAAGCAGTGAAGGAATTAAGAAAATAATAGATATCTTCTTAAGAGATGTTGAAAATAGATTAAGAGAAAGAAATATAACT CTTGAAGTTACTGATGGAGCTAAGGAAATATTAGCTGAAGAAGGATATGATCCAGTATATGGAGCTAGACCATTAAAGAG ATATATAAGCAATGTCTTAGAAACTGAAATAGCTAAGAAGATAATTGCAGGAGAAATTTATGATGGATCTGTTGCTTTAA TAGATGGAGTAGATGGAAAAATTATAGTTTCTAGAAAATAA Protein sequence : MNADKMTLRVQQSLNDAYEIAVKYNNQQLDIIHLFSALVNQKDGLIPNIFEKMGVNIDSLKRDIHVQIDRMPKVLGEAAQ SSGVTATRRINEVLIKAEEISKQFEDSYISVEHVMLAMIDIDKNGAVGEILRKNNITKDGFLKVLNEVRGSQRVDSQDPE GTYEALDKYGTNLIELVKQHKLDPVIGRDEEIRRAVRILSRKTKNNPILIGEPGVGKTAIVEGLAERIVRGDVPEGLKDK VIISLDMGALIAGAKYRGEFEERLKAVLKEVQSSEGKILLFIDEIHTIVGAGKTDGAMDAGNLIKPMLARGELHCIGATT FDEYRQYIEKDKALERRFQPVIVEEPTVEETVSILRGLKERFEIHHGIRIHDSAIVAAAKLSHRYIQDRYLPDKAIDLID EAGAMIRSEIDSLPTELDIIRRKILMLETEKEALSKENDDASKERLVALEKELAELQDKNDEMTIKYEKEKSHISAVRDL KAELDEARGLAEKYEREYDLNKVAELKYGKIPELERKIKEQEASMEKDNENALLKEEVTENEISEIISKWTGIPVTKLVE SEREKLLRLEEELRERVIGQDEATTAVANAVIRARAGLKDERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIVRID MSEYMEKHAVSRLIGPPPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDFKNTI IIMTSNIGSGYLLENKSNEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSSEGIKKIIDIFLRDVENRLRERNIT LEVTDGAKEILAEEGYDPVYGARPLKRYISNVLETEIAKKIIAGEIYDGSVALIDGVDGKIIVSRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_696119.1 | clpB protein | VFG2076 | Protein | 2e-93 | 41 |
| clpB | YP_696119.1 | clpB protein | VFG2084 | Protein | 7e-92 | 41 |
