Gene Information

Name : CPF_0885 (CPF_0885)
Accession : YP_695334.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Virulence
Product : alcohol dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1454
EC number : -
Position : 1050937 - 1052067 bp
Length : 1131 bp
Strand : +
Note : identified by match to protein family HMM PF00465

DNA sequence : 
ATGAAAAGGTTTAAGATTAAGACAGAAATACTTTTTGGAGAAGGAGCCTTAGATTACCTAAAGGAACTTAAGAATAAAAA
AGTTTTTATAGTAACAGATCCTTTTATGGTTAAGTCAGGGACTATAGAAAAATTAACTAATAACCTTACATCATCTGAGG
TTTTTGTATTTAGTGAAATAGTTCCAGATCCACCTATTGAGTTAGTTGTAAGTGGAATAGAAATGCTTAAAGATTTTAAT
CCTGATGTTGTTATTGCTTTAGGGGGAGGGTCTGCTATAGATGCAACTAAGGCAATAATAGATTTTTCTAAAAAATTAGT
TAAATTAAATGATATTAAGTTTATAGCTATACCAACAACAAGTGGTACAGGCTCAGAGGTAACTTCATTTTCCGTAATAA
CAGATAAGCAAAAAGGAGTTAAATATCCTTTAGTATCAGATGAATTATTACCAGACATAGCAATTTTAGATCCAGAACTT
GTTAAAACAGTTCCAAATTTTATAACTGCTGATACAGGAATGGATGTACTTACTCATGCATTAGAAGCATATGTTTCTAA
AAATGCAACAGACTTTTCAGATGCTTTAGCTGAAAAAGCAGCTACTTTAGTTTTTAAATATTTATTAAAAGCTTATGAAA
ATGGAAATGATATAGAAGCTAGAGAAAAAATGCATAATGCCTCATGTTTAGCTGGTTTAGCCTTTAATGAGGCTTCTTTA
GGAGTAAACCATGGTATTGCCCATGTTTTAGGAGGAAAATTCCATGTTCCTCATGGAAGAACTAACTCAATATTATTACC
ACATGTAATAGAATATAATGCAAACATAACAAGCTATAATTCTAAGGAATTTAGTGAAGCTGCAGAAAAATATGCTAAAA
TAGCTAAAATGGTTGGATTACAAGGATCAAATACTAGAGGATTAGTAAAAAATCTTATAAATGAAATTAAAAAGATGCAA
AAGGCAATGAATATGCCTACAACTTTAAGAGAGTGTAAAGTTAATTGTGATGAACTAAAGAGTTTAGAAAATGAAATAGC
TCAATTAGCATTAAAGGATGCATGTACAGAAAGTAATCCAAGAGTGCCAGATGAAAATGATATAATATCTATTTTAAACA
AAATTAAATAG

Protein sequence : 
MKRFKIKTEILFGEGALDYLKELKNKKVFIVTDPFMVKSGTIEKLTNNLTSSEVFVFSEIVPDPPIELVVSGIEMLKDFN
PDVVIALGGGSAIDATKAIIDFSKKLVKLNDIKFIAIPTTSGTGSEVTSFSVITDKQKGVKYPLVSDELLPDIAILDPEL
VKTVPNFITADTGMDVLTHALEAYVSKNATDFSDALAEKAATLVFKYLLKAYENGNDIEAREKMHNASCLAGLAFNEASL
GVNHGIAHVLGGKFHVPHGRTNSILLPHVIEYNANITSYNSKEFSEAAEKYAKIAKMVGLQGSNTRGLVKNLINEIKKMQ
KAMNMPTTLRECKVNCDELKSLENEIAQLALKDACTESNPRVPDENDIISILNKIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42074.1 hypothetical protein Not tested PAI II 536 Protein 1e-76 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPF_0885 YP_695334.1 alcohol dehydrogenase VFG1593 Protein 6e-77 49