Gene Information

Name : CPF_0898 (CPF_0898)
Accession : YP_695347.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Virulence
Product : ethanolamine utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 1063611 - 1064246 bp
Length : 636 bp
Strand : +
Note : identified by match to protein family HMM PF06130

DNA sequence :

ATGGACAATCTATTACAGGACATTATAGAGGAAGTAGTCAGAAGAGTTAAGGATGAAGCTTTTATAGAAGTTGAAGCTTC
AGGTAGACATGTTCATTTAACTAGGGAGCATATAGAAATATTATTTGGAGAAGGACATGAGCTTACTAGAATAAAAGATT
TATCTCAACCAGGTCAGTATGCTTGTAAAGAGAGAGTTACTATATCAGGGCCTAGAGGTAAGATAGATAATGTTGTGGTT
TTAGGACCACCTAGAAATGAAACTCAAGTGGAAGTTTCATTTACAGATGCTCTAGTACTAGGATCTATACCTCCAGTTAA
ATTAAGTGGAGATTTAGAGAATACTCCAGAAATAACAATTTCAACAGAGAGAGCTTCTATAGCATTAAATAGAGGGCTAA
TGGTTGCTAAAAGACATATACACATGACACCAGAGGATGCAATAAAATTTGGTGTTAGTAACAATGAAAGCGTAAAAGTT
AAGGTTTTAGGGAAAAGACCTTTAATATTTGATGATGTAATTGTAAGAGTTAGCAAAGATTACAGAACATTTATGCATAT
TGATTATGATGAAGCAAATGCCTGCGGATTTTCAAAGGGAACTTTTGCCTTAATTGTTGGAAAAGATGAAAAATAA

Protein sequence :

MDNLLQDIIEEVVRRVKDEAFIEVEASGRHVHLTREHIEILFGEGHELTRIKDLSQPGQYACKERVTISGPRGKIDNVVV
LGPPRNETQVEVSFTDALVLGSIPPVKLSGDLENTPEITISTERASIALNRGLMVAKRHIHMTPEDAIKFGVSNNESVKV
KVLGKRPLIFDDVIVRVSKDYRTFMHIDYDEANACGFSKGTFALIVGKDEK

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42070.1	hypothetical protein	Not tested	PAI II 536	Protein	8e-36	44

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CPF_0898	YP_695347.1	ethanolamine utilization protein	VFG1589	Protein	4e-36	44