|
Name : tgt (CPR_1912) Accession : YP_699222.1 Strain : Clostridium perfringens SM101 Genome accession: NC_008262 Putative virulence/resistance : Unknown Product : queuine tRNA-ribosyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0343 EC number : 2.4.2.29 Position : 2110382 - 2111524 bp Length : 1143 bp Strand : - Note : Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) DNA sequence : ATGACTAAAAAAAGATATACTCTTTTAAAAAAAGACGGAAAAGCTAGAAGAGGTGAGTTTGTAACTCCTCACGGTACAAT TCAAACTCCTGTTTTTATGAATGTAGGAACTTTAGCAGCCATAAAAGGTGCTGTTTCTTCAATGGATTTAAAAGAAATAG GATGTCAAGTAGAACTTTCTAATACATACCATTTACATTTAAGACCAGGAGATAAGATTGTAAAGCAAATGGGAGGTTTA CATAACTTTATGAATTGGGATAGACCAATCTTAACAGATTCAGGTGGATTCCAAGTTTTCTCATTAGCAGGAATGAGAAA GATAAAAGAAGAGGGAGTTTATTTTAACTCACACATAGATGGTAGAAAAATATTCATGGGACCAGAAGAAAGTATGCAAA TACAAAGTAACTTAGGTTCAACAATAGCTATGGCTTTTGATGAATGTATTCCAAACCCATCAACTAGAGAATATGTAGAA AAGTCAGTTGCAAGAACAACAAGATGGCTTGAAAGATGTAAAAAGGAAATGGATAGATTAAATTCATTAGATGACACTGT TAATAAAGAGCAAATGCTTTTTGGTATTAACCAAGGTGGAGTTTATGAAGATATAAGAATAGAACATGCTAAAACTATAA GAGAAATGGATTTAGATGGATATGCTATTGGAGGATTAGCAGTTGGAGAAACTCATGAAGAAATGTATAGAGTTATAGAT GCTGTAGTTCCTCACTTACCAGAGGATAAACCAATATATTTAATGGGGGTTGGTCTTCCATCAAATATATTAGAGGCAGT AGAAAGAGGAGTAGACTTCTTTGATTGTGTTTTACCTGCTAGAAATGGAAGACATGGTCATGTTTTCACTAAAGAAGGTA AAATAAACTTAATGAATGCTAAGTTTGAATTAGATGCTAGACCAATAGATGAAGGATGTCAATGTCCTGCATGTAAAAAT TACACAAGAGCATATATAAGACACTTATTTAAGGCTAAAGAAATGTTAGCTATGAGATTATGTGTTCTTCACAATCTATA CTTCTATAATAAGCTTATGGAGGATATAAGAGATGCTATAGATGGCGGATACTTTGCAGAATTCAAAGCTAAAAAGTTAG AAGAGTGGAATGGAAGAGCTTAA Protein sequence : MTKKRYTLLKKDGKARRGEFVTPHGTIQTPVFMNVGTLAAIKGAVSSMDLKEIGCQVELSNTYHLHLRPGDKIVKQMGGL HNFMNWDRPILTDSGGFQVFSLAGMRKIKEEGVYFNSHIDGRKIFMGPEESMQIQSNLGSTIAMAFDECIPNPSTREYVE KSVARTTRWLERCKKEMDRLNSLDDTVNKEQMLFGINQGGVYEDIRIEHAKTIREMDLDGYAIGGLAVGETHEEMYRVID AVVPHLPEDKPIYLMGVGLPSNILEAVERGVDFFDCVLPARNGRHGHVFTKEGKINLMNAKFELDARPIDEGCQCPACKN YTRAYIRHLFKAKEMLAMRLCVLHNLYFYNKLMEDIRDAIDGGYFAEFKAKKLEEWNGRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tgt | AAT96105.1 | Tgt | Not tested | T-PAI | Protein | 8e-85 | 49 |
| tgt | AAT96121.1 | Tgt | Not tested | T-PAI | Protein | 8e-85 | 49 |
| tgt | AAT96069.1 | Tgt | Not tested | T-PAI | Protein | 4e-85 | 49 |
| tgt | AAT96181.1 | Tgt | Not tested | T-PAI | Protein | 4e-85 | 49 |
| tgt | AAT96041.1 | Tgt | Not tested | T-PAI | Protein | 8e-85 | 49 |
