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Name : RHA1_ro02473 (RHA1_ro02473) Accession : YP_702436.1 Strain : Rhodococcus jostii RHA1 Genome accession: NC_008268 Putative virulence/resistance : Unknown Product : shikimate transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 2620266 - 2621624 bp Length : 1359 bp Strand : - Note : tc: 2.A.1.6.6 DNA sequence : ATGAGCGATCACGCCTTCACCCCGGCAGCCGAGAAGCAGGCGCGAAGAGCAGCGCTGAGCAGTTTCGTCGGCGCGGTCAT CGACTGGTACGACTTCCTGCTCTACGGGCTGGTCGCAGCACTGGTCTTCAACTCGGAGTTCTTCCCGAACGTCAGCCCGG CGATCGGCACGCTCGCCGCGTTCGCGACGTTCGGCGTCGGATTCCTGTTCCGGCCGCTCGGCGGCGTCGTGTTCGGCCAC TACGGAGACCGCATCGGACGCAAGCGGATGCTGATCCTCACCGTGCTGATCATGGGCACGAGCACCGCCCTGATCGGGCT GCTGCCGTCGTTCGGGTCGATCGGCTGGTGGGCGCCGGTCCTGCTCGTCACCCTCCGCGCCGTCCAGGGCTTCGCCGTCG GCGGCGAGTGGGGTGGAGCCGCGCTGATGGCCGTCGAGAGCGCGCCGCCGAAGAAGAAGGCGTTCTACAGCAGCGGAGTG CAGGTCGGCTACTCGGTGGGGCTCATCCTCGCCACCGGATTCGTCATGCTCATGAGCAACCTGACCACCGAGGACGCGTT CAGCCAGTGGGGTTGGCGGGTTCCGTTCGTCGCCAGCGTCGTCCTGGTCGGTATCGGTCTGTGGATCCGCGCCGGCGTGC AGGAGAGCCCCGAGTTCGTCGAAAAGGTCGAGAAGGTCGAGGAGGAGCAGACCGCCCAGGACAAGAAGCGGATTCCGCTC GTCGAGGCACTGCGCAACCACCCGAAGGCATTCCTCCAGATCATCGGTCTGCGTTTCGCAGAACTGTTCTCCATGTACAT CGTGACCACGTTCGCGTTGAGCTACTCCACCCAGGAACTGGGGATGGAGCGCAACTTCATGCTCAACGTCGGCCTGCTCG TCGGTGCGGTGGGTATCGGCACCATCCCGCTGTTCGCGTGGCTGTCCGACAAGCACGGCCGGCGGCGCGTCTACATCCTC GGCGCCCTGATCGGCGCGGTGTGCGCGTTCCCGTTCTTCATCTTCCTCGAGAACGGGTCGATGATCGGCACCGTCATCCT CGCCGTGCTCCTCGTCAACATCTCGCACGACATGGTCGTCAGCGTGCAGCAGCCGCTGTTCACCGAAATGTTCGGGGCCG AATACCGCTACAGCGGCGCGGGTGTCGGGTACCAGGTGGCCAGCGCGATCGGCGGCGGCTTCACCCCGTTCATCGCGGCC GCCCTCGTCACCGCCAGCGGCGGGTCCTGGCACCTCGTGGCCGTGTACCTCGCCGGCGGCTGCATCGTCAGCGCCCTGAT CGCGTGGCGACTGCAGCCCGATGCCAGTGCCGACACGACGGACGCCGCCACACCCGCGAAGCTCGAGAACGCGCACTGA Protein sequence : MSDHAFTPAAEKQARRAALSSFVGAVIDWYDFLLYGLVAALVFNSEFFPNVSPAIGTLAAFATFGVGFLFRPLGGVVFGH YGDRIGRKRMLILTVLIMGTSTALIGLLPSFGSIGWWAPVLLVTLRAVQGFAVGGEWGGAALMAVESAPPKKKAFYSSGV QVGYSVGLILATGFVMLMSNLTTEDAFSQWGWRVPFVASVVLVGIGLWIRAGVQESPEFVEKVEKVEEEQTAQDKKRIPL VEALRNHPKAFLQIIGLRFAELFSMYIVTTFALSYSTQELGMERNFMLNVGLLVGAVGIGTIPLFAWLSDKHGRRRVYIL GALIGAVCAFPFFIFLENGSMIGTVILAVLLVNISHDMVVSVQQPLFTEMFGAEYRYSGAGVGYQVASAIGGGFTPFIAA ALVTASGGSWHLVAVYLAGGCIVSALIAWRLQPDASADTTDAATPAKLENAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 3e-136 | 68 |
