|
Name : RHA1_ro00521 (RHA1_ro00521) Accession : YP_700515.1 Strain : Rhodococcus jostii RHA1 Genome accession: NC_008268 Putative virulence/resistance : Unknown Product : major facilitator transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 599519 - 600925 bp Length : 1407 bp Strand : - Note : tc: 2.A.1.6 DNA sequence : GTGAGCAACACCTCCGCGTCCTCGACGAAGCCCGCAGCCACCTCACCGCTCCGGGTGGCGATGGCCAGCTTCATCGGCAC CACGGTCGAGTACTACGACTTCTTCATCTACGGCACCGCCGCCGCCCTGGTCTTCCCCACGCTGTTCTTCCCCGATGTGT CCCCGGCAATCGGAATCCTGCTGTCCTTCGCGACCTTCGGGGTCGGGTTCCTCGCCCGCCCGCTCGGCGGCATCGTCTTC GGCCACTTCGGTGACCGGGTCGGCCGCAAGAAGATGCTGGTGATCTCCCTGGTCGGAATGGGCTCGGCCACCGTCCTGAT GGGACTGCTGCCCGGTTACGCCCAGATCGGGATCGCCGCCCCGATCCTGCTGACCCTGCTGCGCCTGGTGCAGGGCTTCG CGGTCGGCGGCGAGTGGGGTGGGGCCACACTGATGGCCGTCGAGCACGCCCCGACCGCGAAGAAGGGCTTCTTCGGATCC TTCTCCCAGATGGGCGCCCCGGCCGGGACCAGCGTCGCGACCCTGGCATTCTTCGCGGTCTCCCAACTGCCCGACGAGCA GTTCCTCAGCTGGGGCTGGCGACTGCCGTTCCTGTTCAGTGCGGTACTGATCGTGATCGGGCTGTTCATCCGCCTGTCTT TGACCGAGAGCCCCGACTTCGCCGAGGTGAAGGCGCAGAGCGCGGTGGTGCGGATGCCGATCGCCGAAGCATTCCGCAAG CACTGGAAGGAAATCCTGCTCATCGCGGGGACCTACCTGTCCCAGGGCGTGTTCGCCTACATCTGCATGGCCTACCTCGT CTCCTACGGCACCACCGTCGCGGGGATCAGCCGCACCTTCGCCCTCGCCGGGGTGTTCGTCGCCGGCATCGTCGCCGTCA TCCTCTACCCGGTCTTCGGGGCCCTCTCCGACACCTTCGGCCGCAAGACGATGTATCTGCTCGGTGCCGTGGCCATGGGG GTGGTGATCGCCCCGGCGTTCGCGCTGATCAACACCGGCAACCCCTGGCTGTTCATGGCCGCACAGGTACTGGTCTTCGG GATCGCGATGGCACCCGCCGCCGGAGTCACCGGATCCCTGTTCACCATGGTCTTCGACGCGGACGTGCGCTACAGCGGCG TCTCGATCGGCTACACCCTCTCCCAGGTCGTGGGCTCGGCGTTCGCGCCGACGATCGCCACCGCCCTGTATGCCTCCACC GAGTCCAGCACCTCGATCGTCGCCTACCTGCTGGTGGTCTCGGCGATCTCGGTGGTCTCGGTGATCCTGCTGCCCGGCGG CTGGGGCCGCAAAGGCGCAGCGAGCCAACTCGTTCGAGACGAAGCCGGCTCCGCCCGGCCCACCCCCGCGGTGACCACAT TCTCAACCCCGGACACGGCCACGGACCTGCGTGTCCTCGACAAGTGA Protein sequence : MSNTSASSTKPAATSPLRVAMASFIGTTVEYYDFFIYGTAAALVFPTLFFPDVSPAIGILLSFATFGVGFLARPLGGIVF GHFGDRVGRKKMLVISLVGMGSATVLMGLLPGYAQIGIAAPILLTLLRLVQGFAVGGEWGGATLMAVEHAPTAKKGFFGS FSQMGAPAGTSVATLAFFAVSQLPDEQFLSWGWRLPFLFSAVLIVIGLFIRLSLTESPDFAEVKAQSAVVRMPIAEAFRK HWKEILLIAGTYLSQGVFAYICMAYLVSYGTTVAGISRTFALAGVFVAGIVAVILYPVFGALSDTFGRKTMYLLGAVAMG VVIAPAFALINTGNPWLFMAAQVLVFGIAMAPAAGVTGSLFTMVFDADVRYSGVSIGYTLSQVVGSAFAPTIATALYAST ESSTSIVAYLLVVSAISVVSVILLPGGWGRKGAASQLVRDEAGSARPTPAVTTFSTPDTATDLRVLDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 4e-67 | 45 |
