Gene Information

Name : rnhA (FRAAL3840)
Accession : YP_714042.1
Strain : Frankia alni ACN14a
Genome accession: NC_008278
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 4117067 - 4117540 bp
Length : 474 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 6296074; Product type e : enzyme

DNA sequence :
ATGGCGCAGCGCGACGGGCGCGTCGCCGTCGACATCCATACCGACGGGGCGTGCAGCGGCAATCCGGGGCCCGGCGGCTG
GGGCGCGGTGCTGCGCTACGGCGAGCACGAGCGGGAGCTGCACGGCGGCGAGCCGGCGCGCACGACGAACAACAGGATGG
AGCTCACCGCGGCCATCATGGCGCTGGAGGCACTGACCCGGCCGTCCGTGGTGCGCCTGCACACCGACAGCACCTACCTG
CGCAGCGGGATCACCACCTGGATCGCCGGATGGCGGCGCAACGGCTGGCTGACGAAGGACCGCACGCCGGTGCGCAACGC
CGACCTGTGGCAGCGGCTGGAGGCCGCCGTCGCCCGACACGAGGTCGAGTGGTTGTGGGTCCGCGGGCACGCCGGCGACC
CCGGCAACGAACGCGCGGACGCCCTGGCCGCCCGGGGTCTGCAGGAGGCTCGCCAGACACCGCCGCCCGCCTGA

Protein sequence :
MAQRDGRVAVDIHTDGACSGNPGPGGWGAVLRYGEHERELHGGEPARTTNNRMELTAAIMALEALTRPSVVRLHTDSTYL
RSGITTWIAGWRRNGWLTKDRTPVRNADLWQRLEAAVARHEVEWLWVRGHAGDPGNERADALAARGLQEARQTPPPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 2e-36 58