Gene Information

Name : HS_r16S04 (HS_r16S04)
Accession : -
Strain : Haemophilus somnus 129PT
Genome accession: NC_008309
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1778266 - 1779806 bp
Length : 1541 bp
Strand : -
Note : -

DNA sequence : 
AAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATGCAAGTCGAACGGTAACGGGGAGG
GAGATTACTTTCTCTGCTGACGAGTGGCGGACGGGTGAGTAAAGCTTGGGAATCTGGCGAATGGAGGGGGATAGCCACGG
GAAACTGTGGGTAATACCGCGTAATGTCTAAGGACCAAAGGGGTGGGACTGAGAGGCCACCTGCCATTTGATGAGCCCAA
GTGGGATTAGGTAGTTGGTGAGGTAAGGGCTCACCAAGCTGACGATCTCTAGCTGGTCTGAGAGGATGGCCAGCCACACT
GGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGGAACCCTGACGCAGCCA
TGCCGCGTGAATGAAGAAGGCCTTCGGGTTGTAAAGTTCTTTCGGTGATGAGGAAGGCGATTAGTTTAAGAGATTAATTG
ATTGACGATAATCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCG
GAATGACTGGGCGTAAAGGGCACGCAGGTGGTGACTTAAGTGAGGTGTGAAATCCCCGGGCTTAACCTGGGAACAGCATT
TCAGACTGGGTGACTAGAGTACTTTAGGGAGGGGTAGAATTCCACGTGTAGCGGTGAAATGCGTAGAGATGTGGAGGAAT
ACCGAAGGCGAAGGCAGCCCCTTGGGAAGATACTGACGCTCGAGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC
TGGTAGTCCACGCTGTAAACGATGTCGATTTGGGGATTGGGTGAACACTTGGTGCCCGAAGCTAACGTGATAAATCGACC
GCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAAT
TCGATGCAACGCGAAGAACCTTACCTACTCTTGACATCCTAAGAAGCCGCCAGAGATGGTGGTGTGCCTACGGGAGCTTA
GAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCC
TTTGTTGCCAGCATGTTAGGGTGGGAACTCAAAGGAGACTGCCGGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGT
CATCATGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGCGTATACAGAGGGAGGCGAGCCTGCGAGGGTAAGCGA
AGCTCAGAAAGTACGTCTAAGTCCGGATTGGAGTCTGGAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGGATC
AGAATGTCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGTACCAGAAGTAGA
TAGCTTAACGAAAGGGGGCGTTTACCACGGTATGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACC
TGCGGTTGGATCACCTCCTTA

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-125 87.3
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-125 87.3
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-221 85.9
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-221 85.9
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-221 85.9
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-221 85.9