|
Name : ccmF (HS_0398) Accession : YP_718608.1 Strain : Haemophilus somnus 129PT Genome accession: NC_008309 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein F Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 422535 - 424484 bp Length : 1950 bp Strand : + Note : - DNA sequence : ATGATCGCTGAATTAGGCAATTATGCTCTGGCTTTAAGTTTAGCTATTTCTGTTTTATTATCTATTTTTCCATTATGGGG AGCGGAAAAAGGCAATGTACAGATGATGGCTTTAGCTCGCCCAATGACCTATGGTTTATTTGTTAGCTTAACTGTTTCTT TTGTTGCACTTTTCTATTTATTTCTGACAAATGATTTTTCAGTACAATATGTGGTGAACAATTCAAATACCAACTTACCT TTGCAATATCGTCTATCCGCTGTTTGGGGCTCCCACGAAGGTTCTTTATTACTTTGGATTTGGCTATTGACTCTTTGGAG TGCGGCTGTGGCTTTTTTGAGTAAACAATTACCCCAAGAAGCTGTGGCTCGTGTCTTGGCAATTATGGGTATTATTACGA TTGGTTTCTTACTATTTGTGATGTTTACTTCTAACCCTTTTGACCGCACTTTCCCTGATTTTCCTGTTGAGGGAAGAGAA TTAAATCCATTATTACAAGATATTGGTCTGATTTTTCATCCGCCTTTACTTTACATGGGCTATGTGGGTTTTTCCGTTGC TTTTGCTTTTGCTATTGCATCATTGATGACGGGAAAACTGGATACCGCATGGGCAAGATGGTCCCGACCTTGGACAATGG CTGCTTGGGTATTTCTAACATTGGGGATTGTGCTGGGATCGTGGTGGGCATATTACGAACTTGGCTGGGGCGGTTGGTGG TTCTGGGATCCTGTAGAAAACGCCTCTTTAATGCCTTGGCTTGCCGGTACTGCATTGCTTCATTCTCTTGCGGTAACGGA AAAACGTGGTTCATTTAAAGCATGGACAGTATTGCTGGCAATTTTGGCTTTTTCACTGTGTTTATTAGGTACTTTTTTGG TTCGTTCCGGTATTTTGGTTTCGGTGCATGCTTTTGCCTCTGACCCAACTAGAGGTTTATATATTTTAGCTTATTTAATT GTAGTTATTGGCGGTTCGCTAGCGTTATACGCTTATAAAGGCAATCTTATTCGCACAAGAAACAATGCTGAACGTTATTC TCGAGAAACTATGTTGTTAATCAATAATATTTTATTAATGACCGCACTTAGTGTGGTGTTCTTGGGTACTCTCCTGCCTT TAGTACACAAACAATTAGGGTTGGGAACTATTTCTATCGGCTCTCCATTTTTTGATCAAATGTTTTTATTGATCATGATC CCTTTATCACTTTTATTGGGTGTCGGACCTTTAGTAAAGTGGCGTCGAGACCAATTCTGTGCTATTCGTCTTCCGGTTAT CATCAGTTCAATTATTATGCTTATTACCGGATTTGTTTTACCTTATTTTTTACAAGATCGTATTGCAGTGAGTGCCGTTC TTGGTGTCATGATGGCAATGTTTATTCTTCTTCTAGCACTCTATGAATTGCAGCAAAGAGCAACGCATAAGCATAGCTTT TGGATTGGCATAACAAAATTGTCTCGTTCTCATTGGGGAATGGTTTTAGCTCATTTAGGGGTTGCGATGACGATATGGGG AATTGCTTTTAGCCAAAATTACAGTATTGAAAGAGACGTTCGAATGAATGTGGGGGATACAGTAAAAATTGCAGATTATG AATTTACTTTCCAAGGCATATCCGATGCCAATGGTGTCAATTACTTAGGCGGAAAGGCACAAATTGACATCAGTCGAAAC GGTAAGTTTGAAACCACGTTGTTTGCTGAAAAACGTTTCTATACAGTGAGTAAAATGACAATGACTGAAGCGGCTATTGA TTGGGGGTTATCTCGAGATCTATATGTTGCACTGGGCGAAAGTTTAAATGATGGTTCATGGGCTTTACGCTTGTATTATA AACCTTTTATTCGTTGGATTTGGCTGGGAGGTATATTTATGGCATTCGGCGGATTACTCTGTATATTTGACCGACGTTAT CGTTTTGGAAAACTTCTAAAACAAGGATAA Protein sequence : MIAELGNYALALSLAISVLLSIFPLWGAEKGNVQMMALARPMTYGLFVSLTVSFVALFYLFLTNDFSVQYVVNNSNTNLP LQYRLSAVWGSHEGSLLLWIWLLTLWSAAVAFLSKQLPQEAVARVLAIMGIITIGFLLFVMFTSNPFDRTFPDFPVEGRE LNPLLQDIGLIFHPPLLYMGYVGFSVAFAFAIASLMTGKLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYELGWGGWW FWDPVENASLMPWLAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLVRSGILVSVHAFASDPTRGLYILAYLI VVIGGSLALYAYKGNLIRTRNNAERYSRETMLLINNILLMTALSVVFLGTLLPLVHKQLGLGTISIGSPFFDQMFLLIMI PLSLLLGVGPLVKWRRDQFCAIRLPVIISSIIMLITGFVLPYFLQDRIAVSAVLGVMMAMFILLLALYELQQRATHKHSF WIGITKLSRSHWGMVLAHLGVAMTIWGIAFSQNYSIERDVRMNVGDTVKIADYEFTFQGISDANGVNYLGGKAQIDISRN GKFETTLFAEKRFYTVSKMTMTEAAIDWGLSRDLYVALGESLNDGSWALRLYYKPFIRWIWLGGIFMAFGGLLCIFDRRY RFGKLLKQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-152 | 63 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-132 | 53 |
