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Name : rnhA (HS_0604) Accession : YP_718816.1 Strain : Haemophilus somnus 129PT Genome accession: NC_008309 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 647499 - 647963 bp Length : 465 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGTTAAAAAAAATTGAAATTTTTACCGATGGATCTTGTTTGGGAAACCCAGGGGCTGGTGGAATTGGGATTTTGTTGCG TTATAAGCAACATGAAAAAAAACTGTATCAAGGCTTTTTTCAAACTACGAATAATCGTATGGAGTTAAGAGCGGTGATTG TTGCTCTAAATAGCCTAAAAGAACCCTGTTCAGTGATTTTGTATAGTGATAGTCAGTATATGAAAAATGGGATTACAAAG TGGATTTTCAATTGGAAAAAAAATAATTGGAAAACCAGTTCAGGTAATGCGGTGAAAAATCAAGATTTGTGGTGTTCATT GGATCAAGCTATTCAAAAACATCAAATAGAATGGCGTTGGGTCAAAGGACATAATGGACATCGAGAAAATGAAATTTGTG ATCAGCTTGCTAAACAAGGTGCGGAAAACCCAACGCTGGAAGATGTTGGGTATCGAGCTGAATAG Protein sequence : MLKKIEIFTDGSCLGNPGAGGIGILLRYKQHEKKLYQGFFQTTNNRMELRAVIVALNSLKEPCSVILYSDSQYMKNGITK WIFNWKKNNWKTSSGNAVKNQDLWCSLDQAIQKHQIEWRWVKGHNGHRENEICDQLAKQGAENPTLEDVGYRAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 1e-39 | 61 |
