Gene Information

Name : Tery_3852 (Tery_3852)
Accession : YP_723367.1
Strain : Trichodesmium erythraeum IMS101
Genome accession: NC_008312
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 5951160 - 5951471 bp
Length : 312 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: ava:Ava_4472 microcompartments protein

DNA sequence : 
ATGCCAATTGCTGTGGGAATGATTGAAACTAGAGGCTTTCCAGCAGTAGTAGAAGCTGCTGATGCTATGGTGAAAGCAGC
TAGAGTTACCCTAGTAGGTTATGAAAAAATAGGTAGTGCTCGTGTAACAGTAATTGTCCGAGGAGATGTTTCGGAAGTAC
AAGCTTCTGTCGCAGCGGGAATAGAGTCAGCTAAAAGAGTTGATGGTGGTGAGGTAGTATCAACTCATATTATTGCTCGT
CCCCACGAAAACTTAGAGTATGTCTTGCCAATTCGATATACCGAAGAGGTAGAGCAGTTCCGAACTTATTAA

Protein sequence : 
MPIAVGMIETRGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVAAGIESAKRVDGGEVVSTHIIAR
PHENLEYVLPIRYTEEVEQFRTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-17 55
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-18 55
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-17 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tery_3852 YP_723367.1 microcompartments protein VFG1598 Protein 9e-18 55
Tery_3852 YP_723367.1 microcompartments protein VFG1596 Protein 6e-19 55
Tery_3852 YP_723367.1 microcompartments protein VFG1597 Protein 5e-18 52