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Name : clpC1 (H16_A0651) Accession : YP_725167.1 Strain : Genome accession: NC_008313 Putative virulence/resistance : Virulence Product : ATP-dependent protease Clp, ATPase subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 691692 - 694406 bp Length : 2715 bp Strand : + Note : - DNA sequence : ATGGATATTTCGCGTCAGGCTTTATTTGGCCGACTCAATCTCACGCTATTCAAGGCGATCGAAAGCGCGACGGCCTTTTG CAAGCTCCGCGGCAACCCGTACGTGGAGCTTGTGCATTGGCTCCACCAACTGCTGCAAGCCCCGGATGGCGACCTGCAGC GGATGCTGCGCCATGCCGGCGCCGACCTGTCCGTGCTTGAAGCCGACCTGACCCGCGCGCTGGCCGCGTTGCCTGCCGGC GCCACCTCGATCAGTGACTTTTCGTTCCAGCTTGAGTCGGCGATCGAGCGAGCGTGGGTCTATGCGACGCTTGCTTTTTC CGATGACCACGTGCGCGGCGCTTATCTGCTCGCTGCGCTGCTCAAGACGCCGGAGTTGCGCCGTACGGTGCTGGGCATCT CAAGCCAGTTCGCGAAGGTGCGGCCCGATGACCTGGTGGAAATGGCACCGGCGCTCATCGCGCAATCGCCTGAGAGCCGT GAAGCGGCTTATGACGGCAGTGGCCTGGCGCCGGCCACACCGGGTGAAGCCAGTGGCGCGACGGCACCTGCCAGTGCCGG CAAGCCCGCCCTGGGCAGGTACTGCCGCGACCTGACCGAGGAGGCACGCGCGGGCCGGCTGGATCCGGTGATCGGTCGCG AGCATGAGATCCGCACCATGACGGACATCCTGCTGCGCCGCCGTCAGAACAATCCGCTCCTGACCGGAGAGGCGGGTGTC GGCAAGACCGCCGTCATCGAGGGGCTGGCACAGGCCATTGCCGCGGGTGAGGTGCCGCCCAGCCTGAAGGACATCAGGCT GCTGAGCCTCGACGTGGGTGCGCTGCTAGCGGGCGCCAGCATGAAAGGCGAGTTCGAAGCGCGGTTGAAGGGCGTGCTTG AGGAAGCTGCCAAATCCCCGACGCCCGTGATCCTGTTCGTCGATGAGGTCCACACACTGGTTGGCGCCGGTGGCCAGGCC GGCACCGGCGATGCCGCGAACCTGCTCAAGCCGGCGCTGGCGCGTGGGACACTGCGCACGATCGGCGCCACCACCTGGAG CGAATACAAGCGCCACATCGAGAAGGACCCGGCGCTCACCCGCCGCTTCCAGGTCCTGCAGGTCATGGAACCGGACGAAG CCAGGGCGGTTGCCATGGTGCGGGGTCTGGTCCGGACGTTCGAGGCGCATCACCAGGTACTGATCCGCGACGAGGGGGTG CGCGCCGCCGTCAGGCTATCGCATCGCTTTATCCCGTCGCGGCAGTTGCCCGACAAGGCGATCAGCCTGCTCGACACCGC TTGTGCGCGCGTAGCCCTGTCATTGCATGCGCCCCCGGCAGAAGTCGAACATCTGCGCCACGAACTCGCCGCGGCCGACG CCGAGTGCGCACTATTGGCCCGGGAAGCCGGCTTTGGCCGGCCGGACGCTGCGCGGATTGCGCTCGCACGGGCTCGGCGC GAGCAGTTCGAAGCCGACCTGGCTTTGGCCTCGGCGCGCTGGGACCGGGTGCGCGGTCTGGCGACCGACCTGGTCGCCCG CCGATACGCACTGGTGCAGTCCGCGTCGGATGAATCGACTGTGGCCGCGCCGGCGCGACGAACCCTGGATGAGCTCGAGG GCCATCTTCATGCCGCGCAAGCGGATGCGCCGCTTGTGTACACGGAAGTGGATGAACGCGTGGTCGCCGCAATCGTCGCC GACTGGACCGGTATCCCGGTTGGGCGCATGGTCGCGGACGAGGTGGCAACCGTGATGCAGCTGCCGCAGACACTTGGCGA ACGCGTGATCGGGCAAGGCCATGCGCTAACCCAGCTCGGGGAGCGCGTCACGACCGCCCGTGCACAACTGACTGACCCCA ACAAGCCGGTCGGAGTCTTCCTGCTGGCAGGCCCGTCGGGCGTTGGCAAGACCGAGACTGCGCTGGCGTTGGCCGACGCC CTGTACGGCGGTGAGCAAAACCTCATCACCATCAACCTCTCGGAATTCCAGGAGCCGCATACCGTCTCGACGCTCAAGGG CGCGCCGCCGGGTTATGTCGGCTACGGCGAAGGGGGCGTACTGACCGAAGCGGTGCGCCGCCGGCCCTACAGCGTGGTGT TGCTCGACGAGGTCGAGAAGGCCCATGCCGATATCCACGAAGTCTTCTACCAGGTCTTCGACAAGGGCTACATGGAGGAT GGCGAGGGGCGCCATATCGACTTCAGGAACACCATCCTGCTGCTCACCAGCAATGCCGGCTCCGATCTGCTGGCGAATCT CTGTGAAGACCCGGCGCTGATGCCGGAGCCCGCTGCACTGCGCGACGCGCTGATGCCCGAGCTGCGCAAGGTGTTCCCGG CGGCGTTCCTCGGGCGGCTGGTAGTCGTGCCATATCTGCCGCTGGCGGCTGAAAACCTGGGCCGCATCGTGCGCCTGCAT CTCGATCGCGTGGCGGTGCGCATGCAGCATCAGCACGGCATTGTGCTGACTTACGACGACCCGGTGGTCGAGTTCATCGT GGCGCGCTGTCCGGTCGGCGAGACCGGCGCCCGGCAGCTGATCGGCTTCATTGAGCAGGTCATCCAGCCGCAACTGGCGC GCCTGTGGCTGTTGGCCCTGTCCGAGAAGCGCGAGCTCGCCGTGATCGCGATCCGCGTCGCCGACAGCGCGCCTGCCGGG CTCGCCTACCACACCGAATACCGCGTTGGCCACGATGCCGTTGTGCCGGAGTGTCCCGAGGCCGGCTCGGCTTGA Protein sequence : MDISRQALFGRLNLTLFKAIESATAFCKLRGNPYVELVHWLHQLLQAPDGDLQRMLRHAGADLSVLEADLTRALAALPAG ATSISDFSFQLESAIERAWVYATLAFSDDHVRGAYLLAALLKTPELRRTVLGISSQFAKVRPDDLVEMAPALIAQSPESR EAAYDGSGLAPATPGEASGATAPASAGKPALGRYCRDLTEEARAGRLDPVIGREHEIRTMTDILLRRRQNNPLLTGEAGV GKTAVIEGLAQAIAAGEVPPSLKDIRLLSLDVGALLAGASMKGEFEARLKGVLEEAAKSPTPVILFVDEVHTLVGAGGQA GTGDAANLLKPALARGTLRTIGATTWSEYKRHIEKDPALTRRFQVLQVMEPDEARAVAMVRGLVRTFEAHHQVLIRDEGV RAAVRLSHRFIPSRQLPDKAISLLDTACARVALSLHAPPAEVEHLRHELAAADAECALLAREAGFGRPDAARIALARARR EQFEADLALASARWDRVRGLATDLVARRYALVQSASDESTVAAPARRTLDELEGHLHAAQADAPLVYTEVDERVVAAIVA DWTGIPVGRMVADEVATVMQLPQTLGERVIGQGHALTQLGERVTTARAQLTDPNKPVGVFLLAGPSGVGKTETALALADA LYGGEQNLITINLSEFQEPHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEVEKAHADIHEVFYQVFDKGYMED GEGRHIDFRNTILLLTSNAGSDLLANLCEDPALMPEPAALRDALMPELRKVFPAAFLGRLVVVPYLPLAAENLGRIVRLH LDRVAVRMQHQHGIVLTYDDPVVEFIVARCPVGETGARQLIGFIEQVIQPQLARLWLLALSEKRELAVIAIRVADSAPAG LAYHTEYRVGHDAVVPECPEAGSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC1 | YP_725167.1 | ATP-dependent protease Clp, ATPase subunit | VFG2076 | Protein | 0.0 | 56 |
| clpC1 | YP_725167.1 | ATP-dependent protease Clp, ATPase subunit | VFG2084 | Protein | 1e-135 | 42 |
