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Name : clpC2 (H16_B1382) Accession : YP_840901.1 Strain : Genome accession: NC_008314 Putative virulence/resistance : Virulence Product : ATP-dependent protease Clp, ATPase subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1544867 - 1547641 bp Length : 2775 bp Strand : - Note : - DNA sequence : ATGCCGACCCTATGCGAAATCTGCAACGCACGTCCCGCCGTGGCGCGGGTGACGGTGGTTCAGGACGGCGAGCGCAAGAC GATGTCGATCTGCGACTACGACTACCGGCAGCTGCTGCGCCACCAGGACATGCTCAACCCGTTCGACTCCCTGCTGGGTG GCGGCGGGCTGTCCCGCTTCTTCCGAGGAATGGGAGGCGGGATGGATGACGACGAGCATCCCGGATTCTCCACCGAAGTC CCGCGCGAATCCGTCGACCCCACCGATGCCTTCAGCGAGCAGACCATGGAACTGCTGCAGCGCGCCGCGGAGAAGGCGCA CGAGCTGCGGCGCAATGAGCTGGACACCGAGCACCTGCTCTACGTGCTCGCCGATACCGATGTCTGCTCGGCGCTGCTCA AGGAGCTAAAGCTCTCGCCGCAGGATATCAGGGGCTATATCGACGAGCACGCGCAGACCGGAACCGCAGGGCCTGACGCG GCCATCGACCGGATGACGATCTCGCCGCGGCTGAAGAAGGCCTTCCAGTATGCCTTCCAGGCCTCGCGCGACCTCGGGCA TTCCTACGTTGGCCCCGAGCACCTGCTGATCGGCCTGGCCTCGGTCCCGGAAAGCATCGCCGGGACGCTGCTCAAGAAGT ATGGCGTCACCCCCGAGGCACTGCGCCAGAAGGTGGTGAAGGTGGTCGGCAAGGGCGCCGAGGATGGCCGCGTCGATACG CCCACCGGCACGCCCACGCTGGACAAGTTCGGGCGCGACCTGACCGCGATCGCGCGGCAGGGCAAGCTCGATCCGGTGCT GGGCCGTGCGCAGGAGATCGAGAGCGCGATCGAAGTGCTGGCGCGGCGCAAGAAGAACAACCCGGTGCTGATTGGCGAGC CTGGCGTGGGCAAGACCGCGATCGTGGAAGGGCTGGCGCAGCGCATCGTCAATGGCGATGTGCCGGAGGTGCTGCGCGGC AAGCGCCTGGTTGAGGTGAACATCAATTCGATGGTGGCGGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGTGCCAAGCA GCTGATTGACGAGGTCACCGCCAAGAACGACGAACTGATCCTGTTTATCGACGAACTGCACACCATCGTCGGCGCGGGGC AGGGCGGCGGCGAGGGCGGGCTCGATATCGCCAACGTGCTCAAGCCGGCGCTGGCGCGCGGCGAACTGAGCCTGATCGGC GCCACCACGCTGAACGAATACCAGAAGTACATCGAGAAAGACGCGGCGCTGGAACGGCGCTTCCAGCCGGTGCTGGTGCC GGAGCCGACCGTCGAGCAGACCATCGTCATCCTGCGCGGCCTGCGCGACAAGCTTGAGGCGCACCACCAGGTCACCTTCG CCGACGACGCCTTTGTGGCCGCGGCGGAACTGTCGGACCGCTACATCACCGCGCGCTTCCTGCCGGACAAGGCCATCGAC CTGATCGACCAGGCCGCGGCGCGCGTGCGCATCGGCGCCACCTCACGCCCCGCGGATATCCAGGAACTGGAGGCCGAGAT CGCCCAGCTCAAGCGCGAGCAGGACTATGCGTCGTCGCGCAAGCGCTTTGACGAGGCCAAGGGCTTCGAGGACCGCATCA ACGACAAGCAGAAGCGGCTTGACGAGTTGACCGAGGCGTGGCAGCGCAAGACGGGGTCGGAGACCCTGGAGGTGACGGTT GCGGCCATTGCCGAAGTGGTGTCGCGCCTGACCGGCATCCCGGTGACCGACCTTACCCAGGAAGAGCGCCAGAAGCTGCT GAAAATGGAAGCGCGGCTGCGCGAGCGGGTGGTGGGGCAGGACGACGCGGTGGTCGCGGTCAGCGATGCGGTGCGCCTGT CGCGCGCAGGCCTGGGGCAGGCTAACCGCCCGATCGCGACCTTCCTCTTCCTCGGGCCGACCGGCGTTGGCAAGACCGAG CTGGCCAAGGCCCTGGCGGAAACCGTGTTCGGCGACGAGCAGGCCATCATCCGCATCGACATGTCCGAGTACATGGAGCG CCATGCGGTGGCCCGGCTGATCGGTGCGCCGCCGGGCTATGTCGGCTATGACGAAGGCGGGCAGCTGACCGAGCGCGTGC GGCGCAAGCCCTATAGCGTGATCCTGCTGGATGAGATCGAGAAGGCCCACCCGGACGTGAACAACGTACTGCTGCAGGTC TTCGACGACGGCCGCTTGACCGACGGCAAGGGCCGCGTGGTGGACTTCAGCAATACCGTCATCATCGCCACCAGCAACCT GGGCGCGCCGATCATCATGGACAACCTGGAGCAGCCCGAGGACAAGCGCATGCCTGAGAAGGACTTGCGCGAGGCGCTGA TGAAGGTGCTGAAGGGACACTTCCGGCCCGAGTTCCTGAACCGAATCGACGACATCATCGTGTTCCATGCGCTGTCGCGC GAGAACATCCGCGCGATCGTGCAGATCCAGCTGGAGCGTGTGGTGCGCACCGCCGCCGCGCAGGACATCACGGTCAAGCT CGATGATGAGCTGGTCGATCACCTGGTCGAGGTGGGCTACCAGCCTGAGTTTGGTGCGCGGGAACTGCGGCGCCAGATCC GCCAATCGGTCGAGACCGGCCTGGCCAAGGAGATCCTCGGCGACAAGCTGAAATCAGGCGACAGCGTCGAGCTTGGCTAC GACAAGGCAAGCGAAGCCGTGGTCTTCAGGAAGATGGAAGCCGTCAAGAAGCCGAAGGCAGGCAAAGCTGCCGCCAAGGG CGCTGCACCCAGGAAGGCGGACAGCACCGTCGCAGCAGGAGACTCCGGCGCTTGA Protein sequence : MPTLCEICNARPAVARVTVVQDGERKTMSICDYDYRQLLRHQDMLNPFDSLLGGGGLSRFFRGMGGGMDDDEHPGFSTEV PRESVDPTDAFSEQTMELLQRAAEKAHELRRNELDTEHLLYVLADTDVCSALLKELKLSPQDIRGYIDEHAQTGTAGPDA AIDRMTISPRLKKAFQYAFQASRDLGHSYVGPEHLLIGLASVPESIAGTLLKKYGVTPEALRQKVVKVVGKGAEDGRVDT PTGTPTLDKFGRDLTAIARQGKLDPVLGRAQEIESAIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEVLRG KRLVEVNINSMVAGAKYRGEFEERAKQLIDEVTAKNDELILFIDELHTIVGAGQGGGEGGLDIANVLKPALARGELSLIG ATTLNEYQKYIEKDAALERRFQPVLVPEPTVEQTIVILRGLRDKLEAHHQVTFADDAFVAAAELSDRYITARFLPDKAID LIDQAAARVRIGATSRPADIQELEAEIAQLKREQDYASSRKRFDEAKGFEDRINDKQKRLDELTEAWQRKTGSETLEVTV AAIAEVVSRLTGIPVTDLTQEERQKLLKMEARLRERVVGQDDAVVAVSDAVRLSRAGLGQANRPIATFLFLGPTGVGKTE LAKALAETVFGDEQAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRKPYSVILLDEIEKAHPDVNNVLLQV FDDGRLTDGKGRVVDFSNTVIIATSNLGAPIIMDNLEQPEDKRMPEKDLREALMKVLKGHFRPEFLNRIDDIIVFHALSR ENIRAIVQIQLERVVRTAAAQDITVKLDDELVDHLVEVGYQPEFGARELRRQIRQSVETGLAKEILGDKLKSGDSVELGY DKASEAVVFRKMEAVKKPKAGKAAAKGAAPRKADSTVAAGDSGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-160 | 46 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 9e-90 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC2 | YP_840901.1 | ATP-dependent protease Clp, ATPase subunit | VFG0079 | Protein | 0.0 | 52 |
| clpC2 | YP_840901.1 | ATP-dependent protease Clp, ATPase subunit | VFG0080 | Protein | 3e-131 | 47 |
