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Name : ccmF2 (H16_B0956) Accession : YP_729112.1 Strain : Genome accession: NC_008314 Putative virulence/resistance : Unknown Product : cytochrome c biogenesis factor Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1077355 - 1079325 bp Length : 1971 bp Strand : + Note : 15 TMHs DNA sequence : ATGATTCCCGAACTCGGTCAATGGTGCCTGGCGCTTGCGCTCGCGCTGGCGCTGTCGCAAGCGGCGCTGCCGCTCCTGGG GGCGGTGCGCGGCGTCGATGGCTGGATGCGCACCGCACATGCCGCAGCACGCATGCAGTTCCTGTTTCTCTCGCTGGCCT TTGTTTTCCTGTCGGCGGCGCTGCTGGGGAACGATTTTTCGGTGCGCTATGTCGCAAACCACTCAAACAGCAGCCTGCCG GCGATCTATCGCTTTGCCGCCGCCTGGGGCGGCCATGAGGGATCGTTGCTGCTTTGGTCACTACTGCTGGCAGCCTGGTC GGCCCTGGTGAGCTGGCGCAGCGACAGCCTGCCGCTGATGTTCTCGTCACGCGTGCTGGCCGTCCTGGGCATCGTGTCGA GCGGCTTCCTTTGCTTCATGCTGTTCACCTCGAATCCTTTCGAGCGCCTGTGGCCGGCGCCCCCGGACGGCGGTGACCTC AACCCACTGTTGCAGGACATCGGGCTGGTGATCCACCCGCCGATGCTGTATATCGGCTATGTCGGACTGGCGGTGCCCTT CGCGTTCTCGGTGGCCTCCCTTCTGACCGGGCGCATCGATTCACTCTGGGCACGCTGGTGCCGGCCATGGACCATCGGCG CCTGGCTGTTCCTGACACTCGGCATCGCCCTTGGCAGTGCCTGGGCCTACTACGAACTGGGTTGGGGCGGCTGGTGGTTC TGGGATCCGGTCGAGAATGCTTCCTTCATGCCATGGCTGCTTGCCACCGCGCTCATGCATTCGCTGGCGGTCACGGAAAA GCGGGGCATATTCGCCGGCTGGACCCTGTTGCTGGCGATCGCCGCCTTTGGCCTGAGTTTGCTGGGCGCCTTTCTGGTGC GCTCCGGCGTGCTGACCTCCGTGCATGCCTTTGCCGCGGATCCGGGGCGCGGCGTGTTCCTGCTGTCATTGTTCGCATTC ATCGTCGGCGGCGCACTCTGTTTGTACGCGTGGCGCATGGGGCGCGTGCGGAGCAGTTCGGCGTTCGCGCCGTTCTCGCG CGAGGGGGTGCTGATGCTGAACAATCTGTTCCTGGCCGTAGCAACCGCGTCTGTTTTGCTGGGCACAGTCTATCCGCTGG CGCTCGATAGCCTGGGCCTGGCGAAGATATCAGTCGGTGCGCCGTATTTCGAGGCGGTGTTTGTGCCGCTGGTCGTGCCA ATGCTGTTTCTGATGGGCGTGGGCCCGCTGATGCGCTGGAAGCATGCTTCGCTGCCGGATCTGAAGCGTCGGCTGAAATG GGCGCTGGCCGCGGCGCTTGCCTTTGGCCTGGTCACGCCCTGGCTGCTAGGCACATCGAGCATCGGCATCAGCCTCGGCC TGGCCCTGGCCGGCTGGATCACCTGTGCTCTGGTCGCGACCGCGGCCGAGAGCGTGCGCGACCGGCGCGGGGCAGGAGCG TTGCGCAGTCTGGCCGCCCGTCCGCTGTCGTTCCACGGCATGTTGATCGCGCACCTTGGCATTGCAGTGTGCATTGTCGG GGTCACCATGGTCGGCGGCTATGCAGGCGAACGCACGGTGAGCATGTCGGTCGGCGACTCGCTCGAGTTCCGCGACTACC GCTTCCGCTTCGACTCGGTGGAAACACTGGCGCGCGACAACTACCAGGCCCGGCGCGCGAGCATTACGGTGACGCGAGAC GGCCAGCTGGTGACATTGCTGCGGCCAGAGAAGCGCTTCTATCCGGTTCAGCGCAAGGTGATGACCGAGGCGGCGATCGA TCCCGGCCTGACGCGTGACCTCTATGTATCGCTTGGCGAAGCGTTGCCCGACGGTAGCTGGACTTTGCGGCTTTACCACA AGCCGTTCATAAGCTGGATCTGGTCCGGCTGCCTGCTGATGGCATTTGGCGGCTTGCTTGCGCTCGGCGACCGCCGCTAT CGGGCGCGCATCGCGCCGGCCGCCACGCCGCTGAACCTGGGGGTGGAGTGA Protein sequence : MIPELGQWCLALALALALSQAALPLLGAVRGVDGWMRTAHAAARMQFLFLSLAFVFLSAALLGNDFSVRYVANHSNSSLP AIYRFAAAWGGHEGSLLLWSLLLAAWSALVSWRSDSLPLMFSSRVLAVLGIVSSGFLCFMLFTSNPFERLWPAPPDGGDL NPLLQDIGLVIHPPMLYIGYVGLAVPFAFSVASLLTGRIDSLWARWCRPWTIGAWLFLTLGIALGSAWAYYELGWGGWWF WDPVENASFMPWLLATALMHSLAVTEKRGIFAGWTLLLAIAAFGLSLLGAFLVRSGVLTSVHAFAADPGRGVFLLSLFAF IVGGALCLYAWRMGRVRSSSAFAPFSREGVLMLNNLFLAVATASVLLGTVYPLALDSLGLAKISVGAPYFEAVFVPLVVP MLFLMGVGPLMRWKHASLPDLKRRLKWALAAALAFGLVTPWLLGTSSIGISLGLALAGWITCALVATAAESVRDRRGAGA LRSLAARPLSFHGMLIAHLGIAVCIVGVTMVGGYAGERTVSMSVGDSLEFRDYRFRFDSVETLARDNYQARRASITVTRD GQLVTLLRPEKRFYPVQRKVMTEAAIDPGLTRDLYVSLGEALPDGSWTLRLYHKPFISWIWSGCLLMAFGGLLALGDRRY RARIAPAATPLNLGVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 6e-111 | 56 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 5e-109 | 55 |
