|
Name : sync_2057 (sync_2057) Accession : YP_731260.1 Strain : Synechococcus sp. CC9311 Genome accession: NC_008319 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 1829571 - 1831088 bp Length : 1518 bp Strand : - Note : identified by match to protein family HMM PF01565; match to protein family HMM PF02913 DNA sequence : TTGATGACAAAACTGCCTAAGTTGCAACTGTTCGGCACGTCATCAGTGAACTACGACTGGCCAGCGCTTGAGCGGGAATT GAGAGGGTTTCTTCCCTCCAAATCTGTGGTCGCGAAACGGCAAGAATTGTTGTCTTACGACTGTGATGGTCTCACCATGG ATCGGCACATGCCGAGACTTGCGGTGTTGCCGGAAACGGCCGAACAGGTCGCCCAAATTTTGGCGTGTTGTCATCGCCTG GGCATTCCTTTTGTGGCTCGAGGGAGTGGCACGGGGCTTTCAGGTGGTGCGTTGGTTGAGCAAGAAGCGCTGTTGGTCGT GACCAGTCGGATGCGCCGAATTCTCGACATTGATCTCGACAATCAGACGATCACGGTGGAGCCCGGTGTGATCAATAGCT GGGTGAGTCGTGCGGTTGTTGGTGATGGCTTTTATTACGCCCCAGATCCTTCGAGTCAGGTGGTTTGCAGCATCGGTGGC AATGTCGCTGAAAATTCAGGTGGTGTGCATTGCTTGAAGTACGGCGTCACCAGCAACCATGTGCTCTCGTTGGATGTAGT GCTGCCAAATGGCACACCCACGCGCCTTGGTACCTCGTTGTGCGATGCGGCTGAGCTTGATCTTCGGGGTGTGTTTATTG GGAGTGAGGGCACGCTTGGAATTGCCACGGCGATCACCCTGCGCTTGTTGCGTGCTCCCGATGCTGTTGGAGTGTTGCTG GCAGATTTCCCGTCCATGCAGGCCGCTGGAGAGGCAGTGCGCTTGATCACTCGCGCGGGGGTGTTGCCGGCTGGTCTGGA AATCATGGATCAGACCTGCATTCAGGCGGTGAATGAAGCCTTTGGAGAAGAGGAATATCCGCCGGAGGCTGGAGCTGTTT TATTGATTGAGCTCGATGGGCAGGAACAGGAGGTCAAGCAAGCGGTCACGGTCACAACGGCCCTTTGTCGAGAGGCTGGG GCTGGCGCGATCCGTGAAGCCTGGAGTGAAGAGGATCGTGCCCGTCTCTGGAAAGGCCGTAAAAGTGCCATTTCAGCGCT CGGCAGGCAATATCCCAGTTATTACCTCCAAGACGGTGTGGTGCCACGTACGGCTCTGCCAAGGGTTCTCGAGGCCATCG ATCAGCTCAGTGCCGAACACGGTCTAGTGGTGGCGAATGTGTTCCATGCCGGTGATGGAAACCTTCATCCTTTGATCTTG TATCGCTCGTCAGAGCAGGGTGTGAATGAACGGGTGAAAGCTCTCGGCGGCGCGATCATGAATCTTTGCCTGGAGGTCGG TGGGAGTATCAGCGGTGAACACGGAGTTGGCAGCGATAAACGCTGTTATCTCGACCAAATGTTCAGCGCTGAAGATCTGA TCAGCATGCAATGGGTTCGGCTTGCTTTTGATCCGCTTGGCCGTGCCAACCCCGGAAAAATTTTTCCGACACCAAAGAGC TGCGGCGAGTCGTTGCGACGTTCCGTGCAATTGCAAGCAGAGGGACAATCGCTTCCAGAAGAAGCCATTGTGTATTGA Protein sequence : MMTKLPKLQLFGTSSVNYDWPALERELRGFLPSKSVVAKRQELLSYDCDGLTMDRHMPRLAVLPETAEQVAQILACCHRL GIPFVARGSGTGLSGGALVEQEALLVVTSRMRRILDIDLDNQTITVEPGVINSWVSRAVVGDGFYYAPDPSSQVVCSIGG NVAENSGGVHCLKYGVTSNHVLSLDVVLPNGTPTRLGTSLCDAAELDLRGVFIGSEGTLGIATAITLRLLRAPDAVGVLL ADFPSMQAAGEAVRLITRAGVLPAGLEIMDQTCIQAVNEAFGEEEYPPEAGAVLLIELDGQEQEVKQAVTVTTALCREAG AGAIREAWSEEDRARLWKGRKSAISALGRQYPSYYLQDGVVPRTALPRVLEAIDQLSAEHGLVVANVFHAGDGNLHPLIL YRSSEQGVNERVKALGGAIMNLCLEVGGSISGEHGVGSDKRCYLDQMFSAEDLISMQWVRLAFDPLGRANPGKIFPTPKS CGESLRRSVQLQAEGQSLPEEAIVY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 8e-99 | 48 |
