Gene Information

Name : Shewmr4_1646 (Shewmr4_1646)
Accession : YP_733779.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding protein family protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1947735 - 1947941 bp
Length : 207 bp
Strand : -
Note : KEGG: son:SO2628 stress response protein CspD; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGGCAAGCGGAACTGTTAAATGGTTCAACAACGCCAAAGGATTCGGGTTTATTTGCCCTGATCAAGGTGGCGAGGACGT
TTTTGCACACTATTCTACCATTGAAATGGAAGGCTATAGAACTCTAAAAGCAGGCCAACCAGTTCAATTCGAAGTAGAAC
AGGGTCCAAAAGGAATGCACGCTTCAGCCATTTCACCAACAAAATAA

Protein sequence :
MASGTVKWFNNAKGFGFICPDQGGEDVFAHYSTIEMEGYRTLKAGQPVQFEVEQGPKGMHASAISPTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-14 54