Name : rnhA (Shewmr4_2158) Accession : YP_734288.1 Strain : Shewanella sp. MR-4 Genome accession: NC_008321 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 2586469 - 2586945 bp Length : 477 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGACTGAACTAAAACTGATCCACATCTTCACCGATGGCTCTTGCTTAGGCAATCCTGGCCCCGGTGGCTATGGCATTGT AATGAATTATAAGGGCCATACAAAGGAGATGTCCGATGGTTTTGCCCTGACGACCAATAATCGCATGGAATTATTAGCCC CCATCGTTGCCCTCGAGGCCTTAAAAGAGCCTTGCAAGGTCATTTTAACCAGCGATAGCCAATATATGCGCCAAGGGATC ACCACTTGGATCCACGGTTGGAAGAAAAAAGGTTGGATGACCTCTAATCGAACACCGGTGAAAAATGTCGATCTCTGGAA ACGCCTAGACAAAGCCGCCCAACTCCATCATATCGATTGGCGTTGGGTGAAAGGCCACGCCGGGCACGCAGAGAATGAAC GCTGCGATCAACTCGCCCGCGCCGCCGCCGAAGCGAGCCCTACCCAGATCGATGAAGGTTATCAGGCTGAGTCCTAA Protein sequence : MTELKLIHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFALTTNNRMELLAPIVALEALKEPCKVILTSDSQYMRQGI TTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQLHHIDWRWVKGHAGHAENERCDQLARAAAEASPTQIDEGYQAES |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 2e-49 | 66 |