Gene Information

Name : rnhA (Shewmr4_2158)
Accession : YP_734288.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 2586469 - 2586945 bp
Length : 477 bp
Strand : +
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGACTGAACTAAAACTGATCCACATCTTCACCGATGGCTCTTGCTTAGGCAATCCTGGCCCCGGTGGCTATGGCATTGT
AATGAATTATAAGGGCCATACAAAGGAGATGTCCGATGGTTTTGCCCTGACGACCAATAATCGCATGGAATTATTAGCCC
CCATCGTTGCCCTCGAGGCCTTAAAAGAGCCTTGCAAGGTCATTTTAACCAGCGATAGCCAATATATGCGCCAAGGGATC
ACCACTTGGATCCACGGTTGGAAGAAAAAAGGTTGGATGACCTCTAATCGAACACCGGTGAAAAATGTCGATCTCTGGAA
ACGCCTAGACAAAGCCGCCCAACTCCATCATATCGATTGGCGTTGGGTGAAAGGCCACGCCGGGCACGCAGAGAATGAAC
GCTGCGATCAACTCGCCCGCGCCGCCGCCGAAGCGAGCCCTACCCAGATCGATGAAGGTTATCAGGCTGAGTCCTAA

Protein sequence :
MTELKLIHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFALTTNNRMELLAPIVALEALKEPCKVILTSDSQYMRQGI
TTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQLHHIDWRWVKGHAGHAENERCDQLARAAAEASPTQIDEGYQAES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 2e-49 66