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Name : Shewmr4_0234 (Shewmr4_0234) Accession : YP_732372.1 Strain : Shewanella sp. MR-4 Genome accession: NC_008321 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 249336 - 251315 bp Length : 1980 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO0266 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCAGAACTTGGACACTTTTCGCTGATTATAGGAGTGGCATTCGCCTTCTTATTAATCAGCGTTCCCCTTATAGG TGTTGCCCGTAAAGACCAATATCTAGTGAGGTATGCTTGGCCGTTAACCTACGGAATGTTCTTCTTTATCGCTTTATCCG TAGTATCTCTTGGTTACAGCTTTGCCGTTGATGACTTCTCCGTTGCCTATGTGGCACATCACTCGAATTCCCAGTTACCT ATCTTCTTTAAGATTGCGGCCGTATGGGGCGGTCATGAAGGGTCGCTGCTGTTCTGGGTGTTTGCACTATCGACGTGGGC GGCTTCAGTTGCCTTATTCAGTAAAGGCTTAGAAGAAGTGTTCACTGCTAGGGTACTGGCGGTACTGGCATTGATCGTGA TTGGCTTCAGCTTATTTATGCTCCTCACATCTAGCCCATTTGAACGCTTATTTCCAATGCCTGCCGAAGGTCGCGACTTA AACCCAATGCTGCAGGACGTGGGCTTAATCTTCCATCCTCCAATGCTGTACTTAGGTTATGTTGGTTTCTCGGTGAGCTT TGCCTTCGCGATTGCAGCTCTTATGAGTGGTCACCTTGATTCTGCGTGGGCGCGTTGGTCACGTCCTTGGACCTTAGCTG CTTGGATTTTCCTCACGGGCGGTATTGCATTAGGTTCTTGGTGGGCATACTACGAATTAGGCTGGGGTGGCTGGTGGTTC TGGGATCCCGTTGAAAACGCCTCCTTTATGCCTTGGTTAGTGGGTACTGCATTAGTGCATTCACTGATCGTGACCGAAAA ACGCGGTGCTTTCCGCAACTGGACCGTCTTACTGTCTATCTTCGCTTTCTCATTAAGCTTACTCGGTACCTTTATCGTAC GTTCGGGTGTACTGACTTCAGTGCACTCCTTCGCAGCCGATCCAAGCCGCGGTATGTTTATTCTGTTGCTGCTTGGTTTA GCCATCGGCGGGTCGCTCACGCTGTTTGCCTTCCGCGCCAGCGAAATGAGCAGCCCGGCTCGTTTCGAGCTGAAATCAAA AGAAACCATGCTGTTAGTCTGTAACGTGTTACTCACGGTTGCAGCGGGTACTGTTCTGTTAGGTACTTTATACCCACTGC TGATCGATGCATTAGGCATGGGTAAGATTTCTGTTGGACCTCCATACTTCAACGCTGTGTTTGTGCCTATCGTTCTCGTA CTGTTTGGCTTCATGGGCGTTGGTCCAATCATTCGTTGGAAGAAATCCAAAGCTGGTGAGCTCAAGCGCCAATTGCTGGT GCCTGCATTAGTGTCAGCCGCAATTGGTATCGTGACACCATTTATTGTCGATGGTGCCTTTAACACTTGGGTTGCCTGTG GTATCGCCGCGGCCGCTTGGATTGTGTTGGCAACCGCAAGAGCTGCTTACAATATCGTTAAGCCAAAAGACGGTGAATTA AGCATGGCGCGTATGGGGCGTAGCCAATTGGGTATGATTTTGGCCCACTTAGGTATTGCCGTGTCAGTGATCGGTGCCAC TATGGTGTCGAACTACTCGATTGAGAAGAGTGTGCGTATGGGGCCTGGTGTGAGCCAAGAGCTTGCGGGTTACACCTTTA AGTATCTCGAAACTAAGAACGTTGTCGGTCCTAACTACACCGCACAACAAGGTCAAATTGAGATTTATAAAGGCGATAAA CTGCTGACCTTACTCAAGCCCGATCGTCGCCAATACAATGTGCGTACCATGGATATGACCGAAGCCGGTATCGATTGGGG TCTGTTCCGTGACTTATATGTCACCATGGGCGATCCAATCAGCAGCACTGAATTTGCTGTGCGCTTGAACTACAAACCTT TTGTTCGTTGGTTATGGTTTGGAGCAATATTCATGATGGTCGGTGGTTTCTTTGCCGCATCGGATAAACGCTATCGCTCA AAAGTGGCCGCTACGGTTAAGCCACAAGCTGAAAAAGCGAAATTAGCTACCGCGCAATAA Protein sequence : MIPELGHFSLIIGVAFAFLLISVPLIGVARKDQYLVRYAWPLTYGMFFFIALSVVSLGYSFAVDDFSVAYVAHHSNSQLP IFFKIAAVWGGHEGSLLFWVFALSTWAASVALFSKGLEEVFTARVLAVLALIVIGFSLFMLLTSSPFERLFPMPAEGRDL NPMLQDVGLIFHPPMLYLGYVGFSVSFAFAIAALMSGHLDSAWARWSRPWTLAAWIFLTGGIALGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALVHSLIVTEKRGAFRNWTVLLSIFAFSLSLLGTFIVRSGVLTSVHSFAADPSRGMFILLLLGL AIGGSLTLFAFRASEMSSPARFELKSKETMLLVCNVLLTVAAGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIVLV LFGFMGVGPIIRWKKSKAGELKRQLLVPALVSAAIGIVTPFIVDGAFNTWVACGIAAAAWIVLATARAAYNIVKPKDGEL SMARMGRSQLGMILAHLGIAVSVIGATMVSNYSIEKSVRMGPGVSQELAGYTFKYLETKNVVGPNYTAQQGQIEIYKGDK LLTLLKPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPISSTEFAVRLNYKPFVRWLWFGAIFMMVGGFFAASDKRYRS KVAATVKPQAEKAKLATAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 8e-142 | 54 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-117 | 49 |
