Gene Information

Name : Shewmr4_3091 (Shewmr4_3091)
Accession : YP_735219.1
Strain : Shewanella sp. MR-4
Genome accession: NC_008321
Putative virulence/resistance : Unknown
Product : ErfK/YbiS/YcfS/YnhG family protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1376
EC number : -
Position : 3699471 - 3700385 bp
Length : 915 bp
Strand : +
Note : PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; KEGG: son:SO3748 LysM domain protein

DNA sequence :
ATGAGTATGCTTCGCACCACAGCTTTATTATTGACTCTGGTTTTTCCGAGTCTTTCCGCTTTAGCAACGGAATACCCTTT
ACCGTCTTCGAAGAGTCGGTTAGTTGGCGAGAACCTGTATTACACAGTGCCAGAGGGTAAACACACCCTCGAAGATATTG
CCGCTAAATTCCAACTCGGTCTAAGCAACTTGCTGGAAGCAAACCCTGGCGTGGATCCTTTCCTACCAACACCAGGCAGC
AAGCTATTAATTCCTCAACAGCTCATTCTGCCAAATGCGCCGCGTGAAGGCATTGTCATCAACGTCGCCGAAATGCGCCT
GTATTACTATCCAAAAGGTAAGAACACCGTTGAAGTGCTGCCAATCGGTATTGGTCAGATTGGTAAAGATACCCCTGAAA
ACTGGGTCACCAGTGTTCAACGTAAACGCGCTAACCCAACTTGGACACCGACACCACGTATTCGTAAAGAATATGCGGCA
AGGGGCGAAATTCTGCCTGCGGTATGGCCAGCGGGTCCCGATAACCCAATGGGACTCTACGCGCTCTACATTGGTAACTT
GTATGCCATCCATGGTACCAACGCCAGCTTCGGTATTGGTTTACGTGTCAGCCAAGGCTGCGTGCGTTTACGCCACGATG
ACATTGAACACTTATTCAAAACGGTTCCAGTGGGTACCCGAGTACAATTTGTGAACCAACCGATTAAAGCGACCGAAGAA
CCAGATGGTAAGCGCTACTTAGCCGTGCACCAGCCACTGTCGCGCACCATTGCCGAGTTTGAATCAGCAGAGCCAGTCTC
TCTGACCTTACCGAAAGACATCGCCAAGTTTATTGCCAAGGCCGATACCGATTCAGCAGTGATTAAAAAACTGCTCGATG
AGCGTACAGGCGTACCAACGATTATTAATCAGTAA

Protein sequence :
MSMLRTTALLLTLVFPSLSALATEYPLPSSKSRLVGENLYYTVPEGKHTLEDIAAKFQLGLSNLLEANPGVDPFLPTPGS
KLLIPQQLILPNAPREGIVINVAEMRLYYYPKGKNTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRIRKEYAA
RGEILPAVWPAGPDNPMGLYALYIGNLYAIHGTNASFGIGLRVSQGCVRLRHDDIEHLFKTVPVGTRVQFVNQPIKATEE
PDGKRYLAVHQPLSRTIAEFESAEPVSLTLPKDIAKFIAKADTDSAVIKKLLDERTGVPTIINQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
erfK YP_853091.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 4e-87 61