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Name : Shewmr4_0487 (Shewmr4_0487) Accession : YP_732624.1 Strain : Shewanella sp. MR-4 Genome accession: NC_008321 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 556910 - 558949 bp Length : 2040 bp Strand : - Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO0478 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATAAGTATGATCCCAGAAATAGGTCACCTATTGCTCATCATAAGTACTGTGTTGGCATTATTCTCCACAATCATTCA CTTTATTGGCATTCATCAACCACAGTTTTATTTAATCGAGTTCGGCAATAAATTATTTAATGCCATGTTTATAAGCTTAT TGAGCGCACTCTTATGCCTTATTTATGGCTTTATTAGCGATGACTTTTCGGTTGCCTATGTGGCGAATCATTCCAACAGC CAACTCGCCCTCGGTTATAAAATTGCCGCAGTATGGGGCAGCCATGAAGGCTCTATGCTGTTTTGGGTGTTCGCCATCGC GTTATGGGGTGCCATCATCAATTGCCGCCAAGCGAGTAAATTCGTCGACTTAGATAACGCCGATGTGCAGACGGATAAAG CCTACTTTGCACGGCTACTGGCGATTCTCGCGCTCGTTATCCTCGGCTTTAATCTGTTTTTACTCTTTACCTCCAATCCC TTTGCCCGATTACTGCCTAACATCCCCATTGAAGGGCGCGACCTCAATCCGATATTGCAGGACATTGGCCTCATACTGCA CCCACCTATGCTGTTTTTAGGCTATGTCGGGCTAACGGTATGTTTTGCTGCGGCGCTAGCATCCCTGCTGGGAGGCGTAT TAGTGCATCGTCACCTCGAATACTTGCGGCCTTGGGTATTACTGGCATGGATTTTCCTCACGGGAGGCAATGCCTTTGGT TCTTGGTGGGCCTATAACGAATTGGGTTGGGGCGGTTGGTGGTTTTGGGATCCCGTTGAAAATGCTTCTTTTATTCCTTG GCTAGTCGCCACAGCGCTGGTGCATTCTTTAGTGCTGACCAGAAAGACCCAAGGCTTTGCCCTCACCACGCTATTTTTGT GCATCTTGGCATTTTCGCTGAGTTTACTCGGCAGCTTTTTGGTGCGTTCCGGCATAGTGCAATCTGTGCATGCCTTTGCG GCAGATCCCACCAGAGGCATGTCAATCCTATGTTTATTGGTGCTGTTTGTCGGCGCAGCGCTGCTGATTTTTGCACTCAA AGCCCAAGCCTTGAAGCACGAGGTCAGCCCTAGTCTATTGAGCAAAGAGACACTGTTACTGCTTGGCATCATAGTATTAG TGGTTGCAGCCTTTACCGTTCTGCTGGGCACCTTTTATCCCCTGCTATACGAGTTGCTAGGCTTAGGCACTCTGTCGGTC GGCGCCCCTTACTTTAATGCGATTTTTGTCCCACTGACCTTTATCGCGGTGATGCTAATGGGCATAGCACCGTTAATTGC TTGGGGACGATCGCGCGGCAAGCCACTCAAGGTATTAGCCTTGCCTTCTATCGCCATTGTGATTATCGCGGCGCTAATGA GTTATCAAACCCAAACCGATGGTGCTCTCTTCCTATTCCTTGGCTGCGCCAGTGCGTTGTTTTTACTCTGCTGTCTTGGG GTGAGTGTAACAGTGAAATCCAAAGCATTGACGCCACCTAAGCCCGCCATATCGACAACATCAAAGCGCGCCAGATTAGC CATGCTAGTCGGCCATTTTGGTGTGGCAGTCAGCATTATCGGCGCGACCTCGGTATCGTTTTTCGAGCAGGAAGCCTTGC TGCGTATGGGGCCTGGCCAAGGTAAACCCCTTGCCGATTATGTACTGGTCTACGAAAGCACAGAACCAGTAGTAACCCCA AGTTTTAGCGCGATTCAAGCCAATATCAGTATCCGCGCAGCCAAGCAGGATGACGTAGTGCTGGGTTACCTCCATCCACA GCGACAAACTTTTAATAGTAATGGCATGGAAGTGTCCCATGCGGGCATAGACCACGGTTTTTGGCGGGATCTCTATGTCT CTATGGGGCTGCAACTGAGCGACACCGAATATCTGATCCGCATTAGCTATAAGCCCTTGGCGACTTGGATTTGGCTGGGT GCTTTATTGATGATGCTTGCGGGCGCGATTGCCGCTTGGCCAATCAAACAAAGCCACAGAGTCGCACAAACAAAGGCGCT GAATGTCAGTCGCTCACCACAGGAGACAATGACGTTATGA Protein sequence : MISMIPEIGHLLLIISTVLALFSTIIHFIGIHQPQFYLIEFGNKLFNAMFISLLSALLCLIYGFISDDFSVAYVANHSNS QLALGYKIAAVWGSHEGSMLFWVFAIALWGAIINCRQASKFVDLDNADVQTDKAYFARLLAILALVILGFNLFLLFTSNP FARLLPNIPIEGRDLNPILQDIGLILHPPMLFLGYVGLTVCFAAALASLLGGVLVHRHLEYLRPWVLLAWIFLTGGNAFG SWWAYNELGWGGWWFWDPVENASFIPWLVATALVHSLVLTRKTQGFALTTLFLCILAFSLSLLGSFLVRSGIVQSVHAFA ADPTRGMSILCLLVLFVGAALLIFALKAQALKHEVSPSLLSKETLLLLGIIVLVVAAFTVLLGTFYPLLYELLGLGTLSV GAPYFNAIFVPLTFIAVMLMGIAPLIAWGRSRGKPLKVLALPSIAIVIIAALMSYQTQTDGALFLFLGCASALFLLCCLG VSVTVKSKALTPPKPAISTTSKRARLAMLVGHFGVAVSIIGATSVSFFEQEALLRMGPGQGKPLADYVLVYESTEPVVTP SFSAIQANISIRAAKQDDVVLGYLHPQRQTFNSNGMEVSHAGIDHGFWRDLYVSMGLQLSDTEYLIRISYKPLATWIWLG ALLMMLAGAIAAWPIKQSHRVAQTKALNVSRSPQETMTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-85 | 42 |
