Gene Information

Name : secF (Shewmr7_1081)
Accession : YP_737137.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Unknown
Product : preprotein translocase subunit SecF
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG0341
EC number : -
Position : 1246851 - 1247735 bp
Length : 885 bp
Strand : +
Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f

DNA sequence : 
ATGAAGAATCTCAATCTGACCAAATGGCGTTATGTGTCGAGCGCTATCTCTATCTTTTTAATGTTGGCCTCTCTCACCAT
TATTGGTATGAAAGGCTTTAACTGGGGCTTAGACTTTACAGGCGGTGTGGTGACCGAGGTGCAGCTCGATAGGCGGATCA
CCAGCAGCGAGCTGCAACCGCTATTGAACGCGGCTTATCAGCAAGAGGTGACTGTGATTTCGGCCAGTGAGCCCGGGCGT
TGGGTATTGCGTTATGCCGACACTGCACAAAGCAATGTGGATATTGCGCAAACCTTAGCGCCACTGGGCGAAGTGCAAGT
GCTAAATACCAGTATTGTCGGCCCGCAGGTGGGTAAAGAGCTGGCAGAGCAGGGGGGACTCGCGTTATTAGTCGCTATGT
TAGCTATCTTAGGCTATTTGAGTTATCGCTTTGAATGGCGCCTAGCCTCTGGTGCGCTATTTGCGTTAGTACACGACGTC
ATTTTTGTACTCGCGTTTTTTGCGCTGACACAGATGGAATTTAATCTAACTGTGCTCGCGGCGGTGCTGGCTATCCTTGG
CTACTCACTGAATGACTCAATCATTATTGCCGATCGTATTCGTGAATTATTGATTGCAAAACCCAAACTTGCGATTCAGG
AGATTAACAACCAAGCGATTGTCGCGACATTTTCGCGCACTATGGTGACCTCGGGGACCACTCTGATGACGGTTGGAGCA
CTATGGATAATGGGCGGTGGGCCGCTAGAAGGATTCTCGATAGCCATGTTTATCGGCATTTTAACCGGCACGTTCTCCTC
GATCTCAGTCGGGACCTCCTTGCCAGAGTTTCTCGGCTTAGCCCCTGAGCACTATCAAGTTAAACCCATTAGCGATACAC
CGTAG

Protein sequence : 
MKNLNLTKWRYVSSAISIFLMLASLTIIGMKGFNWGLDFTGGVVTEVQLDRRITSSELQPLLNAAYQQEVTVISASEPGR
WVLRYADTAQSNVDIAQTLAPLGEVQVLNTSIVGPQVGKELAEQGGLALLVAMLAILGYLSYRFEWRLASGALFALVHDV
IFVLAFFALTQMEFNLTVLAAVLAILGYSLNDSIIIADRIRELLIAKPKLAIQEINNQAIVATFSRTMVTSGTTLMTVGA
LWIMGGGPLEGFSIAMFIGILTGTFSSISVGTSLPEFLGLAPEHYQVKPISDTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96102.1 SecF Not tested T-PAI Protein 3e-42 41