Gene Information

Name : Shewmr7_2143 (Shewmr7_2143)
Accession : YP_738188.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L25
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1825
EC number : -
Position : 2537613 - 2537900 bp
Length : 288 bp
Strand : -
Note : the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress respo

DNA sequence :
ATGTCTTACACTATCCAAGCACAAACCCGCACTGAAATAGGGAAAGGTTCGAGCCGCCGCCTACGTCATGCAGGTAAAGT
TCCTGCTGTTATTTATGGCGCAGGCAAAGAGCCAGTTTCTATTGTTTTTGATCACAAAGACATCATCAACATTCAAACTA
ACGAAGACTTCTACACTTCTGTTGTCACTATCGTTTTAGATGGCAAAGAAGTAGGTGTTCGTGCACAAGCTATGCAACGT
CACGCGTTCAAGCCAATGATCGAGCACGTTGACTTCGTTTACGCTTAA

Protein sequence :
MSYTIQAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEPVSIVFDHKDIINIQTNEDFYTSVVTIVLDGKEVGVRAQAMQR
HAFKPMIEHVDFVYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01051 YP_001437155.1 50S ribosomal protein L25 Not tested Not named Protein 1e-23 53