Gene Information

Name : Shewmr7_0222 (Shewmr7_0222)
Accession : YP_736284.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmE
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2332
EC number : -
Position : 239841 - 240326 bp
Length : 486 bp
Strand : -
Note : CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocyt

DNA sequence :
GTGAACCCAAGACGCAAAAAGAGACTGACGTTAGCCATTGCATTGATCGGTGGCGTAGCCGCGATTGCTTCGCTACTGCT
GTATGCGCTGAACTCCAACTTGAACTTATTCTATACCCCGTCTGAAATCGTTAACGGTAAGGCCGACACCGGCGTTAAAC
CCGAAGCGGGTCAGCGTATTCGTGTGGGCGGCATGGTAACGGTCGGCTCTATGGTGCGCGATCCAAACAGCCTGCATGTA
CAGTTTGCCGTTCACGATTCATTAGGCGGCGAAATCATGGTGACCTACGACGATCTGCTGCCTGATCTCTTCCGTGAAGG
ACAAGGTATCGTGGCACAAGGCGTACTAGGTGAAGATGGCAAGCTGGCCGCGACCGAAGTTCTGGCTAAGCACGATGAAA
ACTACATGCCGCCAGAAGTAGCAGAGGCCATGGGCCAAAAACATGAGAAGCTTGATTACAGCCAGCAGAAATCGGCAGCG
CAATAA

Protein sequence :
MNPRRKKRLTLAIALIGGVAAIASLLLYALNSNLNLFYTPSEIVNGKADTGVKPEAGQRIRVGGMVTVGSMVRDPNSLHV
QFAVHDSLGGEIMVTYDDLLPDLFREGQGIVAQGVLGEDGKLAATEVLAKHDENYMPPEVAEAMGQKHEKLDYSQQKSAA
Q

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmE YP_217242.1 cytochrome c-type biogenesis protein CcmE Not tested SPI-12 Protein 2e-27 57
cycJ / ccmE AAN62107.1 putative cytochrome C-type biogenesis protein CycJ Not tested PAGI-2(C) Protein 4e-19 48