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Name : Shewmr7_0229 (Shewmr7_0229) Accession : YP_736291.1 Strain : Shewanella sp. MR-7 Genome accession: NC_008322 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 244981 - 246960 bp Length : 1980 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO0266 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCAGAACTTGGACACTTTTCGCTGATTATAGGAGTGGCATTCGCCTTCTTATTAATCAGCGTTCCCCTTATAGG TGTTGCCCGTAAAGACCAATATCTAGTGAGGTATGCTTGGCCGTTAACCTACGGAATGTTCTTCTTTATCGCTTTATCCG TAGTATCTCTTGGTTACAGCTTTGCCGTTGATGACTTCTCCGTTGCCTATGTGGCACATCACTCGAATTCTCAGTTACCT ATCTTCTTTAAGATTGCGGCCGTATGGGGCGGTCATGAAGGGTCGCTGCTGTTCTGGGTGTTTGCACTATCGACGTGGGC GGCTTCAGTTGCCTTATTCAGTAAAGGCTTAGAAGAAGTGTTCACCGCTAGGGTACTGGCGGTACTGGCATTGATCGTGA TTGGCTTTAGCTTATTTATGCTGCTCACATCTAGCCCATTTGAACGCCTATTCCCAATGCCTGCCGAAGGTCGCGACTTA AACCCAATGCTGCAGGACGTGGGGTTAATCTTCCATCCGCCAATGCTGTACTTAGGTTATGTCGGTTTCTCGGTGAGCTT TGCCTTCGCGATTGCCGCTCTCATGAGTGGTCACCTTGACTCTGCTTGGGCGCGTTGGTCACGTCCTTGGACCTTAGCTG CTTGGATTTTCCTCACGGGCGGTATTGCTTTAGGTTCTTGGTGGGCATACTACGAATTAGGCTGGGGTGGCTGGTGGTTC TGGGATCCCGTTGAAAACGCCTCCTTTATGCCTTGGTTAGTGGGTACTGCATTAGTGCATTCACTGATCGTGACCGAAAA ACGTGGTGCGTTCCGTAACTGGACCGTATTACTGTCTATCTTCGCTTTCTCATTAAGCTTACTCGGTACCTTTATCGTAC GTTCGGGTGTACTGACCTCTGTGCACTCCTTCGCAGCCGATCCTAGCCGCGGTATGTTTATTCTGTTGCTGCTTGGTTTA GCCATCGGCGGCTCGCTCACGCTGTTTGCCTTCCGCGCCAGTGAAATGAGCAGCCCTGCACGTTTCGAACTGAAATCAAA AGAAACCATGCTGTTAGTCTGTAACGTGTTACTCACGGTTGCAGCGGGTACTGTGTTGTTAGGTACTTTATACCCTCTGC TGATCGATGCATTAGGCATGGGTAAGATTTCTGTTGGGCCTCCATACTTCAACGCTGTGTTTGTGCCTATCGTTCTCGTA CTGTTTGGCTTTATGGGTGTCGGTCCAATCATTCGTTGGAAGAAATCCAAAGCCGGTGAGCTCAAGCGCCAATTATTGGT GCCAGCTTTAGTCTCGGCAGCGATTGGTATCGTGACGCCGTTTATTGTGGATGGTGCGTTCAACGCTTGGGTTGCCTTTG GTATCGCCGCAGCCGCTTGGATTGTGCTAGCGACGGCAAGAGCCGCTTACAATATTGTTAAGCCTAAAGACGGTGAATTA AGCATGGCGCGTATGGGGCGTAGCCAATTGGGTATGATTTTGGCCCACTTAGGTATTGCCGTGTCAGTGATCGGTGCCAC TATGGTGTCGAACTACTCAATTGAGAAGAGTGTGCGTATGGGGCCTGGCGTGAGCCAAGAGCTTGCGGGTTACACCTTCA AGTATCTCGAAACTAAGAACGTGGTTGGTCCTAACTACACCGCGCAGCAAGGTCAAATTGAGATTTATAAAGGCGATAAA TTGCTGACCTTACTCAAGCCCGATCGTCGCCAATACAATGTGCGTACCATGGATATGACCGAAGCCGGTATCGATTGGGG TCTGTTCCGTGACTTATATGTCACCATGGGCGATCCAATCAGCAGCACTGAATTTGCTGTGCGCTTGAACTACAAACCTT TTGTTCGTTGGTTATGGTTTGGAGCAATATTCATGATGGTCGGTGGTTTCTTTGCCGCATCGGATAAACGCTATCGCTCA AAAGTGGCCGCTACGGTTAAGCCACAAGCTGAAAAAGCGAAATTAGCTACCGCGCAATAA Protein sequence : MIPELGHFSLIIGVAFAFLLISVPLIGVARKDQYLVRYAWPLTYGMFFFIALSVVSLGYSFAVDDFSVAYVAHHSNSQLP IFFKIAAVWGGHEGSLLFWVFALSTWAASVALFSKGLEEVFTARVLAVLALIVIGFSLFMLLTSSPFERLFPMPAEGRDL NPMLQDVGLIFHPPMLYLGYVGFSVSFAFAIAALMSGHLDSAWARWSRPWTLAAWIFLTGGIALGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALVHSLIVTEKRGAFRNWTVLLSIFAFSLSLLGTFIVRSGVLTSVHSFAADPSRGMFILLLLGL AIGGSLTLFAFRASEMSSPARFELKSKETMLLVCNVLLTVAAGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIVLV LFGFMGVGPIIRWKKSKAGELKRQLLVPALVSAAIGIVTPFIVDGAFNAWVAFGIAAAAWIVLATARAAYNIVKPKDGEL SMARMGRSQLGMILAHLGIAVSVIGATMVSNYSIEKSVRMGPGVSQELAGYTFKYLETKNVVGPNYTAQQGQIEIYKGDK LLTLLKPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPISSTEFAVRLNYKPFVRWLWFGAIFMMVGGFFAASDKRYRS KVAATVKPQAEKAKLATAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 6e-142 | 55 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-117 | 50 |
