|
Name : Shewmr7_3543 (Shewmr7_3543) Accession : YP_739580.1 Strain : Shewanella sp. MR-7 Genome accession: NC_008322 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 4199512 - 4201551 bp Length : 2040 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO0478 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATAAGTATGATCCCAGAAATAGGTCACCTATTGCTCATCATAAGTACTGTGTTGGCATTATTCTCCGCCACCATTCA CTTTATTAGCACTCATCAGCCACAGTTTTATTTAATCGAATTCGGCAATAAATTATTTAATGCCATGTTTATAAGCTTAT TGAGCGCACTCTTATGTCTTATTTATGGCTTTATTATCGATGACTTTTCGGTTGCCTATGTGGCGAACCATTCCAATAGC CAACTCGCCCTCGGTTATAAAATTGCCGCAGTATGGGGCAGCCATGAAGGCTCTATGCTGTTTTGGGTGTTCGCCATCGC GTTATGGGGTGCCATCATCAGTTGCCGCCAAGCGGGTAAATTCGTCGACTTAGATAACGCCGATGTGCAGACGGATAAAG CCTACTTTGCCCGGCTACTGGCGATTCTCGCGCTCGTTATCCTCGGCTTTAATCTGTTTTTACTCTTTACCTCCAATCCC TTTGCCCGATTACTACCTAACATCCCCATTGAAGGGCGCGACCTCAATCCGATATTGCAGGACATTGGCCTCATACTGCA CCCGCCTATGCTGTTTTTAGGCTATGTCGGACTGACGGTATGTTTTGCCGCGGCGCTGTCATCCCTACTGGGTGGCGCAT TAGTGCATCGTCACCTCGAATACTTGCGGCCTTGGGTATTACTGGCGTGGATTTTCCTCACGGGAGGCAATGCCTTTGGT TCTTGGTGGGCCTATAACGAATTGGGTTGGGGCGGTTGGTGGTTTTGGGATCCCGTTGAAAATGCTTCTTTTATTCCTTG GCTAGTCGCCACTGCACTGGTGCATTCCTTAGTGCTGACCAGAAAGACCCAAGGCTTTGCCCTCACCACGCTATTTTTGT GCATCTTGGCATTTTCGCTGAGTTTACTCGGCAGCTTTTTGGTGCGTTCCGGCATAGTGCAATCTGTGCATGCCTTCGCA GCAGATCCCACCAGAGGCATGTCAATCCTATGTTTATTGGTGCTGTTTGTCGGCGCGGCGCTGCTGATTTTTGCACTCAA AGCCCAAGCCTTGAAGCATGAGGTCAGCCCTAGCCTATTGAGCAAAGAGACACTGTTACTGCTTGGCATCATAGTATTGG TGGTTGCAGCCTTTTCCGTTCTGCTGGGCACCTTTTATCCCCTGCTATACCAGCTGCTAGGCTTAGGCACTATGTCGGTC GGCGCCCCTTACTTTAATGCGATTTTTGTCCCACTGACCTTTATCGCGGTGACGCTAATGGGCATAGCGCCGTTAATTGC TTGGGGACAATCGCGCGGCAAACCACTCAAGGTATTAGCCTTGCCTTCTATCGCCATTGTGATTATCGCGGCGCTAATGA GTTATCAAACCCAAACCGATGGTGTTCTCTTCCTATTCCTTGGCTGCGCCAGCGCGTTGTTTTTGCTCTGTTGTCTTGGG GTGAGTGTAACAGTGACATCCAAAGCATTGACGCCACCTAAGCCCGCCATATTGACAACATCAAAGCGCGCCAGATTAGC CATGCTAGTCGGCCATTTTGGTGTGGCGGTCAGCATTATCGGCGCGACCTCGGTATCGTTTTTCGAGCAGGAAGCCCTGC TGCGTATGGGGCCGGGCCAAGGTAAACCACTTGCCGATTATGTGCTGGTGTACGAAAGCACAGAACCTGTAGAAACCCCA AGTTTTAGCGCGATTCAAGCCAATATCAGCATTCGCGCAGCCAAGCAGGATGATGTTGTACTGGGTTACCTCCATCCACA GCGACAAACCTTTCATAGCAATGGCATGGAAGTGTCCCATGCGGGCATAGACCACGGTTTTTGGCGCGATCTCTATGTCT CTATGGGGCTACAACTGAGCGACACCGAATATCTGATCCGCATTAGCTATAAGCCCTTAGCGACCTGGATTTGGCTGGGT GCTTTATTGATGATGCTTGCGGGCGCTATTGCCGTTTGGCCAATCAAACAAGGCCACAGAGTCGCACAAACAAAGGCGCT GAATGTAAGTCGCTCACCACAGGAGACAATGACGTTATGA Protein sequence : MISMIPEIGHLLLIISTVLALFSATIHFISTHQPQFYLIEFGNKLFNAMFISLLSALLCLIYGFIIDDFSVAYVANHSNS QLALGYKIAAVWGSHEGSMLFWVFAIALWGAIISCRQAGKFVDLDNADVQTDKAYFARLLAILALVILGFNLFLLFTSNP FARLLPNIPIEGRDLNPILQDIGLILHPPMLFLGYVGLTVCFAAALSSLLGGALVHRHLEYLRPWVLLAWIFLTGGNAFG SWWAYNELGWGGWWFWDPVENASFIPWLVATALVHSLVLTRKTQGFALTTLFLCILAFSLSLLGSFLVRSGIVQSVHAFA ADPTRGMSILCLLVLFVGAALLIFALKAQALKHEVSPSLLSKETLLLLGIIVLVVAAFSVLLGTFYPLLYQLLGLGTMSV GAPYFNAIFVPLTFIAVTLMGIAPLIAWGQSRGKPLKVLALPSIAIVIIAALMSYQTQTDGVLFLFLGCASALFLLCCLG VSVTVTSKALTPPKPAILTTSKRARLAMLVGHFGVAVSIIGATSVSFFEQEALLRMGPGQGKPLADYVLVYESTEPVETP SFSAIQANISIRAAKQDDVVLGYLHPQRQTFHSNGMEVSHAGIDHGFWRDLYVSMGLQLSDTEYLIRISYKPLATWIWLG ALLMMLAGAIAVWPIKQGHRVAQTKALNVSRSPQETMTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 3e-90 | 43 |
