Gene Information

Name : Shewmr7_0436 (Shewmr7_0436)
Accession : YP_736496.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 495670 - 496278 bp
Length : 609 bp
Strand : -
Note : PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: son:SO4157 DNA-binding response regulator

DNA sequence : 
ATGTCTACAAAGCTGCCACTGTATTTAGTCGATGATGATGAGGCGATTCTCGATTCTCTGGGGTTTATGCTCGGGCAATT
TGGCTATCAAGTACAAACCTTTAACAGTGGACGGAATTTTTTAGCCCAATGCCCATTAACGCAGGCGGGCTGCGTGATTT
TAGATAGCAGAATGCCGGAGATCACCGGCCAAGAAGTCCAGCAAAAATTGCTTGAAACCCAAAGCCCGCTAGGGGTGATC
TTTCTCACGGGTCACGGTGATTTGCCTATGGCATTAAGCGCCTTTCGCAAAGGTGCCTGTGACTTTTTTCAAAAGCCTGT
ATCCGGCAAAGCTTTGGTTCAAGCGATTGAAAAAGCCCACAGGGAAAGCCAAGCCAATTTTGAACAACAAAGCCTGCAGC
ATAAATTTGCCCAACTGACCGAGCGTGAGCAGCAAGTGTTGACCCATGTTATCCAAGGCATGACCAACAAGCAGATCTCC
GAGGCCATGTATTTATCCTTAAGAACCATCGAAGTGCATCGCGCTAAGATTATGAAAAAGCTTGAGGTCAGCAATATGGC
CGAATTAGTCCAGCATTTAGCTCACCTGAATACCCTGTTGCCTGAATGA

Protein sequence : 
MSTKLPLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRNFLAQCPLTQAGCVILDSRMPEITGQEVQQKLLETQSPLGVI
FLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAHRESQANFEQQSLQHKFAQLTEREQQVLTHVIQGMTNKQIS
EAMYLSLRTIEVHRAKIMKKLEVSNMAELVQHLAHLNTLLPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 7e-36 42
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 7e-36 42
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 7e-36 42
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 5e-36 42
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 8e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewmr7_0436 YP_736496.1 two component LuxR family transcriptional regulator VFG0488 Protein 2e-36 42