Gene Information

Name : Shewmr7_0881 (Shewmr7_0881)
Accession : YP_736937.1
Strain : Shewanella sp. MR-7
Genome accession: NC_008322
Putative virulence/resistance : Unknown
Product : ErfK/YbiS/YcfS/YnhG family protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1376
EC number : -
Position : 1004556 - 1005470 bp
Length : 915 bp
Strand : -
Note : PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; KEGG: son:SO3748 LysM domain protein

DNA sequence :
ATGAGTATGCTTCGCACCACAGCTTTATTATTGACTCTGGTTTTTCCGAGTCTTTCCGCTTTAGCAACGGAATACCCTTT
ACCGTCTTCGAAGAGTCGGTTAGTTGGCGAGAACCTGTATTACACAGTGCCAGAGGGTAAACACACCCTCGAAGATATTG
CCGCTAAATTCCAACTCGGTCTAAGCAACTTGCTGGAAGCAAACCCTGGCGTGGATCCTTTCCTACCAACACCAGGCAGC
AAGCTATTAATTCCTCAACAACTCATTCTGCCAAATGCGCCGCGTGAAGGCATAGTCATCAACGTCGCCGAAATGCGCCT
GTATTACTATCCAAAAGGTAAGAACACTGTTGAAGTGCTGCCAATCGGTATTGGTCAGATTGGTAAAGATACCCCTGAAA
ACTGGGTCACCAGTGTTCAACGTAAACGCGCGAACCCAACTTGGACACCGACACCACGTATTCGTAAAGAATATGCGGCA
AGGGGCGAAATTCTGCCTGCGGTATGGCCAGCGGGTCCCGATAACCCAATGGGACTCTACGCGCTCTACATAGGTAACTT
GTATGCCATCCATGGTACCAACGCTAGCTTCGGTATTGGTTTACGTGTTAGCCAAGGCTGCGTACGTTTACGCCACGATG
ACATTGAACACTTATTCAAAACGGTTCCCGTGGGTACCCGAGTACAATTTGTGAACCAACCGATTAAAGCGACCGAAGAG
CCAGATGGTAAGCGCTACTTAGCCGTGCACCAGCCACTGTCGCGCACTATTGCCGAGTTTGAATCAGAAGAGCCAGTCTC
TCTGACCTTACCGAAAGACATCGCCAAGTTTATTGCCAAGGCCGATACCGATTCAGCAGTGATTAAAAAACTGCTCGATG
AGCGTACAGGCGTGCCAACGATTATTAATCAGTAA

Protein sequence :
MSMLRTTALLLTLVFPSLSALATEYPLPSSKSRLVGENLYYTVPEGKHTLEDIAAKFQLGLSNLLEANPGVDPFLPTPGS
KLLIPQQLILPNAPREGIVINVAEMRLYYYPKGKNTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRIRKEYAA
RGEILPAVWPAGPDNPMGLYALYIGNLYAIHGTNASFGIGLRVSQGCVRLRHDDIEHLFKTVPVGTRVQFVNQPIKATEE
PDGKRYLAVHQPLSRTIAEFESEEPVSLTLPKDIAKFIAKADTDSAVIKKLLDERTGVPTIINQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
erfK YP_853091.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-87 61