|
Name : Mlg_1894 (Mlg_1894) Accession : YP_742728.1 Strain : Alkalilimnicola ehrlichii MLHE-1 Genome accession: NC_008340 Putative virulence/resistance : Unknown Product : FAD linked oxidase domain-containing protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 2159300 - 2160802 bp Length : 1503 bp Strand : + Note : PFAM: FAD linked oxidase domain protein; KEGG: psb:Psyr_3331 glycolate oxidase subunit GlcD DNA sequence : ATGAGCGCGCACTCCGTATACCGCGAGGAGGACTGCCGCTTCGAGTACGATCGCGAGGACCTGATCGCCCGCCTGGGCGG GGTTCTGGACGACCCCGAAGCGCTGATCACCAACGAAGAGGCCCTACGGGCCTACGAGACCGACGGTCTGGCCGCTTACC GCCAGCTGCCGGTAGCAGCGGTCCTGCCGGACACGGTGGAGCAGGTGCAGGCCATCCTGCGCATCTGCCATGAGCTGGAG GTGCCGGTGGTGGCCCGTGGTGCGGGCACCAGCCTCTCCGCCGGCGCCCTGCCCCACCCCCAGGGTATTCTCCTCAGCCT GTCCCGCTTCAACCGCATTCTGGAGGTGGACGCCGAACGGCGCATTGCGCGGGTCCAGCCCGGGGTGCGCAACCTGGCGG TGTCCGAGGCCGCGGCCCCCTACGGGCTTTACTACGCCCCGGACCCCTCCTCGCAAATTGCCTGCAGCATCGGCGGCAAC GTGGCGGAGAACGCCGGCGGGGTGCACTGCCTGAAGTATGGCCTGACCATCCACAACGTCCTCGAGGCCACCCTGATCAC CATCGACGGCGATGTCATCAAGGTGGGCAGCGAGGCGCCGGACGCCCCCGGATACGACCTGCTGGCGGCGGTGATCGGCT CCGAGGGCATGCTCGGCGTGGTGGTGGAGGTGGCGGTCAAGCTGCTGCCCGAGCCGTTGACCAAGAAGGTGATGCTGGCC GCCTTCCCCACCGTCGAGGCCGGCGGCGAGGCGGTGGCCGGGATCATCGGCGACGGCATCATCCCCGGTGGCCTGGAGAT GATGGACAACGCCGCCATCCGCGCCGCCGAGGACTTCGTCCACGCCGGCTACCCGGTGGATGCCGCCACCATCCTGATCT GCGAGCTGGACGGCAGTGAGGCGGAGGTGGCCGCCCAGTGCGACCGGGTGCGCAAGCTGATGGAGCGCTACGGGGCCACC GAAATCCGCATCGCCGAGACCCCCGAACAGGCGCAGCGCTTCTGGGCCGGGCGCAAGGCGGCCTTTCCCGCGGTGGGCCG TATCTCCCCCGACTACTACTGCATGGACGGCACCATCCCACGCAAGCACCTGGGCACGGTGCTCAAGCGCATGCAGGCCC TCTCCGAGCAGTACGGCCTGCGGGTGGTGAACGTCTTTCACGCCGGTGACGGCAACCTGCACCCGCTGGTGCTCTACGAC GGCAACGTCCCGGGCGAGCTGGAACGCACCGAGGAGCTGGGCGGGCGCATCCTGGAGTTGTGTGTGGAGGTCGGCGGCAC GGTCACCGGCGAGCACGGCGTGGGCATGGAGAAGCTCGACCAGATGTGCGTGCAGTTCAACAAGGCGGAGCGCGAGCAGT TCTTCGCCCTCAAGCGCGCCTTCGATCCCAAGGGGCTGCTCAACCCCGGCAAGGCCATCCCCACCCTGCACCGCTGCGCC GAGTTCGGCGCCATGCACGTGCACCACGGCGAACTGCCCTTCCCGGACATCGAGCGCTTCTGA Protein sequence : MSAHSVYREEDCRFEYDREDLIARLGGVLDDPEALITNEEALRAYETDGLAAYRQLPVAAVLPDTVEQVQAILRICHELE VPVVARGAGTSLSAGALPHPQGILLSLSRFNRILEVDAERRIARVQPGVRNLAVSEAAAPYGLYYAPDPSSQIACSIGGN VAENAGGVHCLKYGLTIHNVLEATLITIDGDVIKVGSEAPDAPGYDLLAAVIGSEGMLGVVVEVAVKLLPEPLTKKVMLA AFPTVEAGGEAVAGIIGDGIIPGGLEMMDNAAIRAAEDFVHAGYPVDAATILICELDGSEAEVAAQCDRVRKLMERYGAT EIRIAETPEQAQRFWAGRKAAFPAVGRISPDYYCMDGTIPRKHLGTVLKRMQALSEQYGLRVVNVFHAGDGNLHPLVLYD GNVPGELERTEELGGRILELCVEVGGTVTGEHGVGMEKLDQMCVQFNKAEREQFFALKRAFDPKGLLNPGKAIPTLHRCA EFGAMHVHHGELPFPDIERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-136 | 65 |
