|
Name : GbCGDNIH1_0269 (GbCGDNIH1_0269) Accession : YP_744090.1 Strain : Granulibacter bethesdensis CGDNIH1 Genome accession: NC_008343 Putative virulence/resistance : Unknown Product : heme chaperone--apocytochrome heme-lyase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : 4.4.1.- Position : 313716 - 315668 bp Length : 1953 bp Strand : - Note : - DNA sequence : ATGATTCCTGAACTGGGCCATTTCGCGCTGGCACTGGCCTGCGCCTTTGCCGCCGCGCAGGCCATTCTCGCGCTCTGGGG TGCACAGCGCCGTGATGCAAGGCTGATGGCAGCGGCACCGGCCCTCGCGCTCGGGCAGATGATGGCCCTGATCACCTCGT TCGGGGCCCTGATGTGGGCCAGCGTGGTCAATGATTTCACCGTGCTGAACGTGGCCCAGAACAGCCAGTCCGCCAAGCCG CTGCTGTACCGGATCAGCGGCACATGGGGAAATCATGAAGGCTCCATCCTGCTATGGTGCCTGATCCTCGCGCTTTGCGG CGGCGCGGTGGCAGCGTTCGGGCGCAACCTGCCTTCCGCCCTGCGGGCACGGGTTATCGGTGTGCTGGGGGCGTCCTCGG TCGGGTTTCTGCTGTTCAGCCTGATCGAAAGCAATCCGTTCGTACGGATATGGCCTGCACCGATGGAAGGCAGCGGCATG AACCCGCTGCTGGAAGATCCCGGCCTCGCGATTCATCCGCCTATTCTCTACACCGGCTATGTCGGCTTCGCGATCCCGTT CGCTTTCGCGGTGGCGGCCCTGCTGGAAGGGCGGATCGATGCCTCCTGGGGGCGCTGGGTGCGTCCATGGGCGCTGGTTT CTTGGGCGTTCCTGACCTGCGGCATCGCACTGGGATCATGGTGGGCGTATTATGAACTCGGCTGGGGCGGCTTCTGGTTC TGGGATCCGGTCGAGAACGCCTCCCTGCTGCCATGGCTGACCGGAACCGCGCTGGTGCATTCAGCCATCGTCGTGGAAAA GCGCGAGGCGCTGAAAATCTGGACCGTTCTGCTGGCCATCGCGACGTTTTCGCTTTCCCTGTCAGGCACGTTCCTCGTGC GGTCGGGTATCCTGAATTCCGTCCATTCCTTCGCCAATGATCCGGCCCGCGGCGTGTTCATTCTGGGCCTGCTGGCACTG GTGATCGGCTCTGCGCTGCTTCTGTTCGTGTTCCGCGCCCCGGTTCTGTCCGTGTCCGGCGTCTTTGCACCGATTTCGCG TGAAGGCTCGCTGGTGCTGAACAACGTGCTGCTCTGCTCCATTGCAGCCGTGGTATTCACCGGCACGACCTATCCGCTGT TCGCACAGTTACTGTTCGGAGCGCAGATCAGCGTGGGGGCGCCCTTCTTCAACGCTACCGTGATGCCGCTGGCCATTCCC GTTTTCATCGCCATGGCGGTCGGGCCAATGCTGCCATGGAAACGCGCCCGGCTCTGGCCTGCCCTGTCCCGGCTGTGGTG GGCGGCGCTGGTTGCCCTCGCGGCCGGTCTATGGGGGGCTATGGGACGCCAGTTCCTGCCGGCGCTGGCTTTCGGCTGTG CAGGCTGGCTGATTACTGGCTCCTTCGCCGACATCATCGAGCGGATCAAGCTGTTTCGTGTGCCGCCCCGTACCAGTTTC GCCCGTCTCGGTGGGGTGCCGCGATCCGCATGGGGAGCCGCCATCGCCCATGCCGGGCTGGGGATCACCATCTGCGGTAT TGCCGCGATGTCGATGGCCCAACAGACCATTGTTGCGGTGAAACCGGGCCAATCCACCGAACTCGGTGGCTATCGCTGGA CACTGGACAGCATCACCGATGCGCCCGGCCCGAATTACGTCGCCCGGGTGGCCACCATCACCGTGACCAGTCAGGGGCAC CTCGTCACCGTGCTGACCCCGTCCCGCCGTGCCTATCCGGTGCAGCGGCAGAACACCACCGATACCTCTATCCAGACCAA CGGCCTGCGTGACCTGTATGCCGTGCTGGGTGAGGAACGGGATGGCACTGCCGTACTGCGCCTGCATGTCAATCCGCTGG CGCCGTGGATATGGCTGGGTGCGCTGGTCATGGCGATTGGTGGATGCCTGTCCCTGACCGACCGCCGGTTACGTGTGGGT GCCCCTGCCCGCAGCCGTGCCGTTCACGCCTGA Protein sequence : MIPELGHFALALACAFAAAQAILALWGAQRRDARLMAAAPALALGQMMALITSFGALMWASVVNDFTVLNVAQNSQSAKP LLYRISGTWGNHEGSILLWCLILALCGGAVAAFGRNLPSALRARVIGVLGASSVGFLLFSLIESNPFVRIWPAPMEGSGM NPLLEDPGLAIHPPILYTGYVGFAIPFAFAVAALLEGRIDASWGRWVRPWALVSWAFLTCGIALGSWWAYYELGWGGFWF WDPVENASLLPWLTGTALVHSAIVVEKREALKIWTVLLAIATFSLSLSGTFLVRSGILNSVHSFANDPARGVFILGLLAL VIGSALLLFVFRAPVLSVSGVFAPISREGSLVLNNVLLCSIAAVVFTGTTYPLFAQLLFGAQISVGAPFFNATVMPLAIP VFIAMAVGPMLPWKRARLWPALSRLWWAALVALAAGLWGAMGRQFLPALAFGCAGWLITGSFADIIERIKLFRVPPRTSF ARLGGVPRSAWGAAIAHAGLGITICGIAAMSMAQQTIVAVKPGQSTELGGYRWTLDSITDAPGPNYVARVATITVTSQGH LVTVLTPSRRAYPVQRQNTTDTSIQTNGLRDLYAVLGEERDGTAVLRLHVNPLAPWIWLGALVMAIGGCLSLTDRRLRVG APARSRAVHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-105 | 47 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-90 | 46 |
