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Name : Neut_0059 (Neut_0059) Accession : YP_746312.1 Strain : Nitrosomonas eutropha C91 Genome accession: NC_008344 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 58689 - 60650 bp Length : 1962 bp Strand : - Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rme:Rmet_2390 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATTGCTGAACTCGGTCATTTTTCACTGATTCTGACGCTATTCGTGGCGCTTGCGCAGGGCTGTTTAGCCCTCGCCGG CGCGGCGCGTGACAATGCTGTCTGGATCGCCTTTGCTCGACCCGCCGCGCGCGCGCAGTTTCTTTTAATTATTTTCAGCT TTGCGACGCTGGGTTGGTCCTTCATCGTTAAGGATTTTTCGGTGGCTTACGTCGCCCAGAATTCCAACTCGCAACTGCCC TTGCTGTACCGTATCGCCGCCGTCTGGGGTGGTCACGAGGGATCGCTCTTGCTGTGGCTACTGATGCAAACAGGCTGGGC ATATGCAGTAAGTGTGTTCTCAAAGCAGCTGCCCGATGTCATGGTGGCACGCGTCTTGGGGGTGTTGGGCCTGGTCACCG CTGGATTCCTGCTCTTTGTGCTGCTTACCTCTAACCCGTTCGAGCGCCTGGTACCTGCACCCATAGAGGGTATGGACCTG AATCCGCTACTGCAAGACATCGGACTGATATTTCATCCGCCACTGCTGTACATGGGCTATGTCGGATTTTCGGTAGCATT CGCGTTTGCCATTGCCGCACTGCTGGCGGGGCAGCTCGATTCGACATGGGCACGTTGGTCTCGGCCCTGGGCGACGGCAG CGTGGCTGTTCCTGACCTTGGGTATCGCCTTGGGAAGTTGGTGGGCCTATTACGAACTGGGTTGGGGCGGCTGGTGGTTC TGGGATCCGGTAGAGAACTCTTCGTTTATTCCTTGGCTGGTGGGTACCGCGTTGATCCACTCCCTGGCGGTGACTGAAAA GCGTGCCAGCTTCAAGAACTGGACGGTGCTGCTTGCTATCAGTACGTTCTCGCTTTCATTACTAGGGGCTTTTCTTGTAC GGTCTGGCGTGCTGACGTCAGTACACGCCTTCGCCACCGATCCGCGCCGAGGCGTATTCATTTTGATGCTATTCGCCGTG GTGGTGGGCTCGTCCTTGTTTTTATTTGCACTGCGCGCACCCAAGGTGGGCATGGGCGGGCGGTTTGAACTGATATCGCG TGAATCTCTCTTGCTGGTGAACAACGTATTGTTGGCCGTAGCAGCAGGGGCCGTCATTCTCGGAACCTTGTATCCGCTTT TCATTGATGCGCTCGGGTTAGGCAAACTTTCCGTGGGGCCGCCATACTTTAATGCCGTTTTCATACCGCTGATGGTGCCG GCGCTGCTTCTCATGGCGGTAGGTCCGGTGGCTAACTGGAAGTCGGCCAAGATAAGCGCTCTGATGAAACACCTTCATGT TCCGGCTGTAGTGGCGCTTGTGGTCGGTGTTGGCGCACCGTTCTTGCTGGGGCGTTGGTCGGCGCTGGTGGCGTTAGGTC TGGCACTGGCCACGTGGATTGCCACTGCGGTGGTTAAGGGCATCGTTGACCGTATGCGGGCTACGCGCACTGGGCTGCGA GCCCAACCGCGTAGCTGGCTAGGCATGCATCTGGCCCATTTAGGTATTGCCGTGTTCGTGGCTGGCGTGACGCTCGTCAT GGGCTATGAAACTGAACAGGACGTTCGTATGACGCCCGGCAGCACGGTAAGCACAGGGGGCTATGACTTGAAGTTTCTAG GCGTCAATAAAGCACAGGGACCTAATTATGTTGCAGACATCGGTGACATCGAGCTGTCACGCGATGGTCGGGTCTTACGT TTGCTTCATCCCGAAAAACGTAGCTACATCTCCTCGGAAATGCCCATGACAGAAGCAGCCATTGACGCCAACGGCTTGCG TCATGTGTACGTCGCCTTGGGTGAGCCGCTCGCCGACAGCGCCTGGAGCGTGCGTGTTTACTACAAACCATTCGTTGATT GGATCTGGATTGGTTGCATTTTGATGGCGCTGGGTGGGTTGTTAGCTATTAGTGATCGTCGTTATCGACTTAAGCGCCGC GAACGTAAGGCTGCTTTGGTCGCAGCAGGAGCCACAGCATGA Protein sequence : MIAELGHFSLILTLFVALAQGCLALAGAARDNAVWIAFARPAARAQFLLIIFSFATLGWSFIVKDFSVAYVAQNSNSQLP LLYRIAAVWGGHEGSLLLWLLMQTGWAYAVSVFSKQLPDVMVARVLGVLGLVTAGFLLFVLLTSNPFERLVPAPIEGMDL NPLLQDIGLIFHPPLLYMGYVGFSVAFAFAIAALLAGQLDSTWARWSRPWATAAWLFLTLGIALGSWWAYYELGWGGWWF WDPVENSSFIPWLVGTALIHSLAVTEKRASFKNWTVLLAISTFSLSLLGAFLVRSGVLTSVHAFATDPRRGVFILMLFAV VVGSSLFLFALRAPKVGMGGRFELISRESLLLVNNVLLAVAAGAVILGTLYPLFIDALGLGKLSVGPPYFNAVFIPLMVP ALLLMAVGPVANWKSAKISALMKHLHVPAVVALVVGVGAPFLLGRWSALVALGLALATWIATAVVKGIVDRMRATRTGLR AQPRSWLGMHLAHLGIAVFVAGVTLVMGYETEQDVRMTPGSTVSTGGYDLKFLGVNKAQGPNYVADIGDIELSRDGRVLR LLHPEKRSYISSEMPMTEAAIDANGLRHVYVALGEPLADSAWSVRVYYKPFVDWIWIGCILMALGGLLAISDRRYRLKRR ERKAALVAAGATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 0.0 | 82 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-131 | 58 |
