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Name : secF (Sfri_0980) Accession : YP_749671.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 1145845 - 1146768 bp Length : 924 bp Strand : + Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGAACTCAACTCAAACAAATTATTCAACAGACAAGCTGCAATACTTAACTAAGTGGCGTTACGCATCGAGTCTAATCTC GATTGTATTAATGCTGTTATCATTAACCGTTATAGGAGTAAAAGGGTTTAATTGGGGCTTAGATTTTACAGGCGGTGTGG TTACTGAAATTCAAGTGGACCATCGCATCACTGCCAGTGAGATACAGCCATTGATGACCGCCGCTTACAAACAAGATGTT AGTGTTATTTCAGCCAGTGAACCAGGCCGTTGGGTATTACGATATGCCAATATACCAGATGAGAATCAACGCCCAGAACT GGCTGAAGTATTAGCGCCATTAAATACGGATATCAACGTGTTAAACAGCAGTATCGTTGGGCCACAAGTGGGGCAAGAGT TGGTTGAGCAAGGTGGTTTAGCCTTACTCGTCGCTATGCTATGCATTATGGGGTATCTAAGCTTTCGCTTTGAATGGCGT TTAGCTTCAGGCGCTCTGTTTGCTTTGGTACATGATGTAGTGTTTGTGTTAGCTTTTTTCGCGTTAAGCCAAATGGAATT TAATTTAACTGTATTAGCCGCGATAATGGCAATTTTAGGGTATTCGCTCAATGACTCAATTATTATTGCTGACAGGATCC GGGAGCAGTTAGTGGCTAAACCACAGTGGAATATAACTGATATTAACAACTTAGCGATTAAATCAACCTTTTCCAGAACC ATGGTCACATCAGGCACTACGTTAATAACAGTTGTGGCTTTATGGATTTTGGGTGGGGCACCGCTTGAAGGTTTTTCTAT TGCGATGTTTATTGGTATTTTAACCGGTACTTGGTCATCGGTTTCAATTGGAGCTACCTTGCCAGAGTTTCTAGGCTTAA AGGCTGAGCATTATCAAGTTATCCCAATACCTGATTATCCCTGA Protein sequence : MNSTQTNYSTDKLQYLTKWRYASSLISIVLMLLSLTVIGVKGFNWGLDFTGGVVTEIQVDHRITASEIQPLMTAAYKQDV SVISASEPGRWVLRYANIPDENQRPELAEVLAPLNTDINVLNSSIVGPQVGQELVEQGGLALLVAMLCIMGYLSFRFEWR LASGALFALVHDVVFVLAFFALSQMEFNLTVLAAIMAILGYSLNDSIIIADRIREQLVAKPQWNITDINNLAIKSTFSRT MVTSGTTLITVVALWILGGAPLEGFSIAMFIGILTGTWSSVSIGATLPEFLGLKAEHYQVIPIPDYP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 2e-40 | 41 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 1e-40 | 41 |
