Gene Information

Name : Sfri_0177 (Sfri_0177)
Accession : YP_748878.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 185925 - 186671 bp
Length : 747 bp
Strand : -
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: son:SO0261 heme exporter protein CcmC

DNA sequence : 
ATGTGGAAATGGTTACATTCTTACGCAGACCCTGAACGGGCATATAAATTGTCAGGCACATTGTTGCCTTGGTTTAGTAC
ACTGGCAATATTGCTGGTTGGAACAGGCAGTATTTGGGGTTTATTGTTTGCCCCAACAGATTACCAACAAGGTGACAGTT
ACCGAATCATCTTTATCCATGTACCTGCTGCGTCTATGTCAATGGCCGCTTATATGGGTATGGCTATTGCTTCATTTATT
GGCTTAGTTTGGCAGATAAAGTCGGCAGATTGGGCCGCTGCAGCAATTGCTCCTATTGGCGCCGTAATTACCTTTATTGC
CTTATTAACAGGTGCTGCATGGGGTAAACCTATGTGGGGAACTTGGTGGGTATGGGATGCACGTTTGACATCTGAATTGG
TATTGCTGTTTCTTTACCTTGGTGTGATCTCACTGTATGCATCATTTGAAGATAAAGTCCTCGCCGCTAGGGCTTCTGGA
ATTCTGGCGATTGTAGGTGTAATTAATATACCAATTATTAAATACTCCGTGGATTGGTGGAGTAGTTTACATCAACCATC
TACCATTAAAATCACAGAAAAATCAACGATGTCGACTGATATGTTATACCCACTGCTAATTAACATTTTTGGCTTTGGTA
TGATGATTGGGGCGATTACTTTGATCCGTTATAGAACAGAGATCCTTGCGCGCAATGGTATGCGCCCTTGGGTGAGAGAT
TTAGCTACAGCAGAGGAGGCAAAATAA

Protein sequence : 
MWKWLHSYADPERAYKLSGTLLPWFSTLAILLVGTGSIWGLLFAPTDYQQGDSYRIIFIHVPAASMSMAAYMGMAIASFI
GLVWQIKSADWAAAAIAPIGAVITFIALLTGAAWGKPMWGTWWVWDARLTSELVLLFLYLGVISLYASFEDKVLAARASG
ILAIVGVINIPIIKYSVDWWSSLHQPSTIKITEKSTMSTDMLYPLLINIFGFGMMIGAITLIRYRTEILARNGMRPWVRD
LATAEEAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 6e-38 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfri_0177 YP_748878.1 heme exporter protein CcmC VFG1856 Protein 4e-40 49